Gene Shel_13340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13340 
Symbol 
ID8395225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1527706 
End bp1528410 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID644986089 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003143706 
Protein GI257064034 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATA CCATAGATGA ACTGCGACAA TACTATGCAT CCATGCCTCA GGAGTTTGGG 
TTCGCCAGCA TGTGCAAGAT GACGCTTCCT CAAAATGTAG AAGGAATGCG AGTCATCGAC
ATCGGATGCC GACGCGGCAA AGGCGTGCAG AAGTTCGCGT CGCGCATCGG TTCTGACGGT
TTCGTACTGG GAGTCGAGCC GAACGACGCC TTCGTGCGCG AAGCTGTGGA TCGCATCCGC
GAAGCGGGGG CGGAATCCGA CAAGCCGCTC GCGCCGACCG AAATCCGACA GGGCTTTTTC
GAAATGCTCG GCCTGAGCCC GGGAGAAGAG CACACGTTCG ATTTGGTCTA TGCCAACAGC
AGCTTGAACC TCTGCAAGAA TATGCCCGAA GCCGTGCGTC AAATGGCGTT GGCTGCCAGG
CCTGGCGCAA CCTTGTTGTT AGAAACGGTG CTTGCGACGG GGGAGCGGGA TGTTGCCGTT
CTTGGTGCCG CACGAAAGAT GGGAAATGCC GTGCAATCGG CCCCCTCGAA GGACGAGTTC
TTGGGTTGGC TGTCCGACGC GGGGTTTATC GATGTGCAGC GCACTGTCGT GCAGAAGCTG
ACGCCCGACG CTGCCTACAA GCAGGACACG AAGGTTCCAT GCGTCGACTC GGTCGAGTGC
GTGGAATTCG AAGAGACGAT CGTCACGGCA AGGGTTCCCC GCTGA
 
Protein sequence
MEYTIDELRQ YYASMPQEFG FASMCKMTLP QNVEGMRVID IGCRRGKGVQ KFASRIGSDG 
FVLGVEPNDA FVREAVDRIR EAGAESDKPL APTEIRQGFF EMLGLSPGEE HTFDLVYANS
SLNLCKNMPE AVRQMALAAR PGATLLLETV LATGERDVAV LGAARKMGNA VQSAPSKDEF
LGWLSDAGFI DVQRTVVQKL TPDAAYKQDT KVPCVDSVEC VEFEETIVTA RVPR