Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_13340 |
Symbol | |
ID | 8395225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1527706 |
End bp | 1528410 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986089 |
Product | ubiquinone/menaquinone biosynthesis methylase |
Protein accession | YP_003143706 |
Protein GI | 257064034 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.132657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATA CCATAGATGA ACTGCGACAA TACTATGCAT CCATGCCTCA GGAGTTTGGG TTCGCCAGCA TGTGCAAGAT GACGCTTCCT CAAAATGTAG AAGGAATGCG AGTCATCGAC ATCGGATGCC GACGCGGCAA AGGCGTGCAG AAGTTCGCGT CGCGCATCGG TTCTGACGGT TTCGTACTGG GAGTCGAGCC GAACGACGCC TTCGTGCGCG AAGCTGTGGA TCGCATCCGC GAAGCGGGGG CGGAATCCGA CAAGCCGCTC GCGCCGACCG AAATCCGACA GGGCTTTTTC GAAATGCTCG GCCTGAGCCC GGGAGAAGAG CACACGTTCG ATTTGGTCTA TGCCAACAGC AGCTTGAACC TCTGCAAGAA TATGCCCGAA GCCGTGCGTC AAATGGCGTT GGCTGCCAGG CCTGGCGCAA CCTTGTTGTT AGAAACGGTG CTTGCGACGG GGGAGCGGGA TGTTGCCGTT CTTGGTGCCG CACGAAAGAT GGGAAATGCC GTGCAATCGG CCCCCTCGAA GGACGAGTTC TTGGGTTGGC TGTCCGACGC GGGGTTTATC GATGTGCAGC GCACTGTCGT GCAGAAGCTG ACGCCCGACG CTGCCTACAA GCAGGACACG AAGGTTCCAT GCGTCGACTC GGTCGAGTGC GTGGAATTCG AAGAGACGAT CGTCACGGCA AGGGTTCCCC GCTGA
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Protein sequence | MEYTIDELRQ YYASMPQEFG FASMCKMTLP QNVEGMRVID IGCRRGKGVQ KFASRIGSDG FVLGVEPNDA FVREAVDRIR EAGAESDKPL APTEIRQGFF EMLGLSPGEE HTFDLVYANS SLNLCKNMPE AVRQMALAAR PGATLLLETV LATGERDVAV LGAARKMGNA VQSAPSKDEF LGWLSDAGFI DVQRTVVQKL TPDAAYKQDT KVPCVDSVEC VEFEETIVTA RVPR
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