Gene Shel_13180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13180 
Symbol 
ID8395209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1507167 
End bp1507862 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content58% 
IMG OID644986074 
Producthypothetical protein 
Protein accessionYP_003143691 
Protein GI257064019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.731417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACT ATGTATTCAC TTCGATTCTC GGTTCCACCG AGTCCGCAGC CGCTGGCGTG 
ACGTCCGGCG ACTACTTCCT GTGCACCATC GCGTCCATCC TGCTGGGCCT GATCGTCGCC
GTGGTCTACA TGTACCGCAA CAGCTACTCG AAGAGCTTCG TCGTGACCAT CGCGCTTCTG
CCGGTCATCG TGCAGATGGT GATCATGCTG GTCAACGGCA ACATCGGCGC GGGCGTGGCG
GTCATGGGCG TGTTCAATCT GGTACGTTTC CGTTCCATCC CCGGCAGCGC CAAGGACATC
GCCAGCGTGT TTCTGTCCAT GGCAATAGGC CTGGCGACGG GCATGGGTTT CCTAAGCCTG
GCCATCGTGT TCACCATCAT CGTGTCGATA CTGAACATCG TGTTCTCCCG CACGTCCTTC
GGCAAGAAAC CGATGCCGCC CAAGGTGCTC TCCATCACGG TTCCTGAGGA CCTGGAATTC
GAAGGCATGT TCGACGAGGT GTTCACGCGC TACACCGAGG AGAACGAGCT TACCAGCGTG
CAGACCTCCA ACATGGGCGC GCTCTACCAG CTGAAATACA ACATCCAGAT GAAGGAAGGC
GAAAGCGAGA AGGCCATGAT CGACGAGCTG CGCTGCCTGA ACGGCAACCT GAAGATCTCC
TGCGGCCTGG CACCCATCGC CAAGGAGGTG CTGTAA
 
Protein sequence
MLDYVFTSIL GSTESAAAGV TSGDYFLCTI ASILLGLIVA VVYMYRNSYS KSFVVTIALL 
PVIVQMVIML VNGNIGAGVA VMGVFNLVRF RSIPGSAKDI ASVFLSMAIG LATGMGFLSL
AIVFTIIVSI LNIVFSRTSF GKKPMPPKVL SITVPEDLEF EGMFDEVFTR YTEENELTSV
QTSNMGALYQ LKYNIQMKEG ESEKAMIDEL RCLNGNLKIS CGLAPIAKEV L