| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12340 |
|---|
| Symbol | |
|---|
| ID | 8395125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1419669 |
|---|
| End bp | 1420682 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644985991 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143611 |
|---|
| Protein GI | 257063939 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAA GGGATTATGA CATTGATTTC GTGATACCTT GGGTTGATGG AAGTGACCCT
GCTTGGCTTA CTGAGAAAGC CAACTATTCC GGTTCTGACA TGGGGATTGA GGATAGCATT
GCGCGCTATC GCGATTGGGG TCTTCTGCGT TATTGGTTTC GAGGGGTCGA GCAATTCGCA
CCTTGGGTCC GCAAGATACA TTTTGTAACA TGGGGGCATT ACCCCGAATG GCTTAACTTG
GATCATCCGA AGTTGCATCT CGTCAAACAC GAGGACTATA TTCCCGAAGA GTATCTGCCT
ACGTTCAGTG CTAATACTAT CGAGCTTAAT TTTCATCGCA TTGAAGGATT AGCTGACCGC
TTTGTTTACT TCAATGATGA TATGTTTCTG ATTCGTCCGA CGAAAGCGGA AGACTTCTTT
GAAAAGGGTC TACCAAAAAT ACCGGCAATT GGCACCCCTT TAAAGGTCGG CTATGGAGAT
TGGTTCTTTA TGTCTATCGT GGACAATGCT GTGATAAACC AGCACTTCGA TTTTCACGGC
GTAGTCAAGA GACACCCTCT TAAGTGGATC AATCCAAAAT ACGGCTTAAA TGTGCTTCGA
ACGCTTACGG TTCTTCCCTA TCCATATTTC TGCGGAATAA TGGAGTTCCA TCTTGCGAAC
CCACTTACCA AGAAAGCTTA CCTTGAGGTC TGGGAAAAAG AAGAGGCGCT TTTGGATTCA
ACGTGCCGCA ATCGCGTTCG AAGTACGTTC GATGTCAATC AGTATCTGGT AAAGAACTGG
CAGCTTGCCA AAGGCGAGTT TATGCCTGGA AACCCAGCAT TGGGTAAAGC GTTTCAGTTC
AGGGATACCC CAATGATCAC CTTGAAGGAT ATGGCAACAT ATATTGAGTC TGGGCATGGC
AGAATGGTGT GCATTAATGA TTCTGCAGTT ATCGAAAAGG CAGATCAGGT CATAGTCGGT
TGCCAGCGTA TTATGAAAAA ACTATTACCC AACAAATCAG CATTTGAATT ATAG
|
|---|
| Protein sequence | MMTRDYDIDF VIPWVDGSDP AWLTEKANYS GSDMGIEDSI ARYRDWGLLR YWFRGVEQFA
PWVRKIHFVT WGHYPEWLNL DHPKLHLVKH EDYIPEEYLP TFSANTIELN FHRIEGLADR
FVYFNDDMFL IRPTKAEDFF EKGLPKIPAI GTPLKVGYGD WFFMSIVDNA VINQHFDFHG
VVKRHPLKWI NPKYGLNVLR TLTVLPYPYF CGIMEFHLAN PLTKKAYLEV WEKEEALLDS
TCRNRVRSTF DVNQYLVKNW QLAKGEFMPG NPALGKAFQF RDTPMITLKD MATYIESGHG
RMVCINDSAV IEKADQVIVG CQRIMKKLLP NKSAFEL
|
|---|
| |