Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12280 |
Symbol | |
ID | 8395119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1413490 |
End bp | 1414002 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644985985 |
Product | predicted membrane protein |
Protein accession | YP_003143605 |
Protein GI | 257063933 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACA TGCCTGAAAA CAATGCGGTT GACAAAGACG GGGGCTTTCT TGTGCGCAAG GTGGCCGGGC GCACGCGTTT CGTCGCAACG GTGCCTGCGG TGGGCCTGCT GATCTCTTCG GTCGTGCTGG CGTTAGAGAC GCTCGTCGCG CTGGTCGTCT CGTCGGGCGA ATACCTGATG GGCGAAATCA GCCTGCACGA CCTGACCATC GATTTCATCG AGGACGCCGA CGCGTTCCTG CTCGCCGTTG CGCTGTACAT ACTGTCGATC GGCCTCGTGA ACCTATTCAT TAGCGAGAAC ATCCCTCTTC CCAAATGGCT CGAGTTCAGA GATTTCGACG ACCTGAAGGA GCGGTTGACC GGCGTCATCG TTGTGATGAT CGGCGTGTTC TTCCTGGGCC ACGTGCTGAA AGGGGCTCAG GGCATCGATA CGCTATGGAT CGGGCTGGGC TGCGCCGCAA TCATCATCGC CCTGTCGGTC TTCATGGGGA CGGTTTTCAA GCACGGAGAT TAG
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Protein sequence | MDDMPENNAV DKDGGFLVRK VAGRTRFVAT VPAVGLLISS VVLALETLVA LVVSSGEYLM GEISLHDLTI DFIEDADAFL LAVALYILSI GLVNLFISEN IPLPKWLEFR DFDDLKERLT GVIVVMIGVF FLGHVLKGAQ GIDTLWIGLG CAAIIIALSV FMGTVFKHGD
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