Gene Shel_12280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12280 
Symbol 
ID8395119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1413490 
End bp1414002 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content58% 
IMG OID644985985 
Productpredicted membrane protein 
Protein accessionYP_003143605 
Protein GI257063933 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA TGCCTGAAAA CAATGCGGTT GACAAAGACG GGGGCTTTCT TGTGCGCAAG 
GTGGCCGGGC GCACGCGTTT CGTCGCAACG GTGCCTGCGG TGGGCCTGCT GATCTCTTCG
GTCGTGCTGG CGTTAGAGAC GCTCGTCGCG CTGGTCGTCT CGTCGGGCGA ATACCTGATG
GGCGAAATCA GCCTGCACGA CCTGACCATC GATTTCATCG AGGACGCCGA CGCGTTCCTG
CTCGCCGTTG CGCTGTACAT ACTGTCGATC GGCCTCGTGA ACCTATTCAT TAGCGAGAAC
ATCCCTCTTC CCAAATGGCT CGAGTTCAGA GATTTCGACG ACCTGAAGGA GCGGTTGACC
GGCGTCATCG TTGTGATGAT CGGCGTGTTC TTCCTGGGCC ACGTGCTGAA AGGGGCTCAG
GGCATCGATA CGCTATGGAT CGGGCTGGGC TGCGCCGCAA TCATCATCGC CCTGTCGGTC
TTCATGGGGA CGGTTTTCAA GCACGGAGAT TAG
 
Protein sequence
MDDMPENNAV DKDGGFLVRK VAGRTRFVAT VPAVGLLISS VVLALETLVA LVVSSGEYLM 
GEISLHDLTI DFIEDADAFL LAVALYILSI GLVNLFISEN IPLPKWLEFR DFDDLKERLT
GVIVVMIGVF FLGHVLKGAQ GIDTLWIGLG CAAIIIALSV FMGTVFKHGD