| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11800 |
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| Symbol | |
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| ID | 8395071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1361333 |
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| End bp | 1363894 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644985937 |
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| Product | X-X-X-Leu-X-X-Gly heptad repeat-containing protein |
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| Protein accession | YP_003143561 |
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| Protein GI | 257063889 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.032406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTC AGAACGTGTT CGCCAAAACC GGCTACATAT TGGCTGGCGC GGCATTATGC
AGCCTTTCCG TCATGCCTGC CTGGGCGGTA AGCGGCGAGC AGACCGCAAA CACGACCGCT
GAGGGCGACG ACACGACGAA GACAATCAAA ACCATGGGCG ACCAGACGTC CGTCACCAAA
TCGGAAACGG TGCGGGTCTA CACCGACGCC ACCGGCGCCG TGACCTCGGT CAAAGTGTCC
GACTGGCTGC AGAACCCCCA GAAGCTCTCG CAGCTGTACG ACAGTTCGAC GTTGGCGGCC
ATCGAAGGCG ACCAGGGCGA CGAGGAGCTC AGCGGCTCGG GCGACGCCAT GGTGTGGGAA
GCGGACGGCG AAGACGTCCG TTACGCGGGC GCAAGCGACG CGGAGCCGCC GGTAAAGGTC
AATTTCGCAT ACCAGCTGGA CGGCAAGGAT ATTTCCCCTG ATGAGCTGGC TGGCAAAAGC
GGGCATCTGA CCATCCGCGC GACGTTCGAG AACACGTCCT GGGTGGAGAA GAAAATCGAC
GGCAAGACTG CCAAGATCTA CACGCCGTTC GTGTGCGTGA CCGGCTGCGT CGTGGACAAC
GACGTGTTCA CGAACATCGA GGTGGACAAC GGCAAGGTCA TCAACAACGG CGCCGATTCC
GTGGTGGTCG GTTTCGCCGT GCCGGGCCTG CAGGAAAGCC TGGGCCTGGA CGACATGAAG
GACGCCGACG GCAAAGCTCT GGACGTGGAG ATCCCCGAGG GATTCACCAT CGAAGCGGAC
GTCGAGAACT GCCAGATGCA CAGCATGTTG ACCCTGGTCA GTCCCGATAT GCTGTCGGAT
TTCGATACGG ACGACCTGGA CTTCGGCGAC ATGGGCGGCT CGGGCGACGA GCTGTCCGAC
GCCATGCGCG AGATCATCAA CGGCTCGGGC GAATTGTCCG ACGGGCTGGG CCAGCTGGCC
GAAGGCGCTT CGCAGCTCGA TGACGGCGTG GGCACGCTGG CAGGGTCCGT GTCCGAACTG
CCCGCGGGCA CGCAGGCCCT GGCGGACGGC ACATCGCAGG TGCAAGGCGG GTTGTACCAG
CTCAAGACCC AGACGTCGAC GCTGCCCACC AGCACCAAGC AGCTGGCCGG CGGTGCAGGC
GCCTTGGCGG ACGGCCTGAC CGACGCCACG GAAGGCTCTT CGTCGCTGGC GGCGGGCGCC
CGGCAGCTGC TGGACGGCCT GGTCCAGCTG AAGGGGAGCG CCGCCGACAA GACCGGCCTG
GCGTACCTCA GCGTGTCGTT GGGAAGCGAC GAGGCCTCCC AAACGCTGAT CGGCGTCACC
AACACGGTGG CCAAGGGTTT GGCCGACTTG GAGGGAAGCG AATCCGAATC AACAGGCCTG
TACGGCTTGA AGAATGGTGT TACTGCAGTT CAGGGTGCTG CGGAGGCATC CAGGGACTAT
GCCGGATCGG CCGCTTCCGC ATTGGGTGAC GAAGGTGCCG CGGGTGCGGT TTCCGGCGCG
CAGGCCAACG TGGACGCGGC GGCCGAGGGT GTTTCGGCAG CGCAGGACGC CCTTGCCGAG
GCGCAGGCGG CGCTGCCTTC CGATGTTGTC GTCGACACGG CATCGGCCCA GGTCGGCATC
GATAACGCCA TCGCGACGGT GGAAGGTTCC GCCCTGACCG ACGAGGAAAA GGCCGCTGTC
ATATCCGAGC TTACGGCCGC GAGGGATTCG CTGCCCACGT CGGCCTCGGT GGATGCGAGC
GCTGCCAGCG GCAAGATCGA CGAGGCGTCG GCCCAGCTCA CAGATGCGGA AAGCGGTATT
TCTGGGGCGC AGGACCAGCT TGCGACGGCT TCGACGGACA TCGAGTCCGC CCGTGCCGAT
GCAGAAGGCG CGGCCCAGTA CGCCCAGGGT GCCGTCGACG GCGCAGCCGG GGTTTCGTCT
GGTCTTGACG AGGTGATATC CGCAGTTCAA GGGCTTGAAG CCGGGGCCGG TGCCGTGCAT
GACGGTCTGG TTGCCGCCAA GTCCGGCGTG GACGCGGCCC TTGTCGGGTT GGGTGACGAA
GCCACCGCAG GCACGCTCAT CAACGGGGCC AGCCAGCTGT CGGGAGGCGC TGGTTCGCTA
ACGGATGGCC TGCAGACGGC GGCATCGGGC GCCGATGCTC TGGCAAAGGG AACGTCCCAG
CTCGCAGGCG CAACGCCCGC GTTGGTGGCA GGCATCCAGG CTCTTTACGA CGGCAACGCC
CAGATAGACG ACGGCATGGC CGGCCTGGCA CAGGCGACGC CCCAACTGGT AAGCGGCATC
GGCGCCCTGT CGGAAGGCAC CTCGGCCCTG TCCGAGAGCA TGGCGGCCGC ATCCGACGGC
TCGGCGGCCC TGACCGACGG CCTGAAGGAG TTCGACAAGG AGGGCATCCA GAAGATCGTC
GACCTGCTCA ACAACGATGT GACCGGCATG ACCGATCGCC TCGACGCGGT GGTCGAAGCC
GGCAAAGCCT ACACCAACTT CTCCGGCATC GACGAGGATC ATTCCGGCTC GGTCAAATTC
ATCTACCAGA CCGACCCCAT CGAGATTCCC GAAGAGGAAT AG
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| Protein sequence | MKAQNVFAKT GYILAGAALC SLSVMPAWAV SGEQTANTTA EGDDTTKTIK TMGDQTSVTK
SETVRVYTDA TGAVTSVKVS DWLQNPQKLS QLYDSSTLAA IEGDQGDEEL SGSGDAMVWE
ADGEDVRYAG ASDAEPPVKV NFAYQLDGKD ISPDELAGKS GHLTIRATFE NTSWVEKKID
GKTAKIYTPF VCVTGCVVDN DVFTNIEVDN GKVINNGADS VVVGFAVPGL QESLGLDDMK
DADGKALDVE IPEGFTIEAD VENCQMHSML TLVSPDMLSD FDTDDLDFGD MGGSGDELSD
AMREIINGSG ELSDGLGQLA EGASQLDDGV GTLAGSVSEL PAGTQALADG TSQVQGGLYQ
LKTQTSTLPT STKQLAGGAG ALADGLTDAT EGSSSLAAGA RQLLDGLVQL KGSAADKTGL
AYLSVSLGSD EASQTLIGVT NTVAKGLADL EGSESESTGL YGLKNGVTAV QGAAEASRDY
AGSAASALGD EGAAGAVSGA QANVDAAAEG VSAAQDALAE AQAALPSDVV VDTASAQVGI
DNAIATVEGS ALTDEEKAAV ISELTAARDS LPTSASVDAS AASGKIDEAS AQLTDAESGI
SGAQDQLATA STDIESARAD AEGAAQYAQG AVDGAAGVSS GLDEVISAVQ GLEAGAGAVH
DGLVAAKSGV DAALVGLGDE ATAGTLINGA SQLSGGAGSL TDGLQTAASG ADALAKGTSQ
LAGATPALVA GIQALYDGNA QIDDGMAGLA QATPQLVSGI GALSEGTSAL SESMAAASDG
SAALTDGLKE FDKEGIQKIV DLLNNDVTGM TDRLDAVVEA GKAYTNFSGI DEDHSGSVKF
IYQTDPIEIP EEE
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