Gene Shel_11650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11650 
Symbol 
ID8395056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1342051 
End bp1344360 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content65% 
IMG OID644985922 
Productpredicted Fe-S oxidoreductase 
Protein accessionYP_003143548 
Protein GI257063876 
COG category[K] Transcription
[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases
[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.920993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACG AGAAGAAGCA CCCCGGCGGA CATCCCGGCG GTATACCGCT GAAGCACCCC 
GCAGGCATCC CTAAAACCGG GAAGATGCCC GAATGGGTGA AGAAGATGCT GGCCGAAGGT
GACAAGAGCT CCATGTCTGG ACGCCGCGGC TACCGTCCCG GCGCCGGCCC GGCCGCCCAG
GCCTACGAGG AGCGCACGGG CATCAAGGCG CCCAAGATTG TGGCATGGGA AATCACCCGC
AGCTGCAACC TGGCCTGCGC CCATTGCCGC GCGGCGGCCC ACTGCACCCC GTATCCCGGC
GAGCTGTCGC TGGACGAGTG CAAGGCCGTC ATGGACGACA TCGCCTCGAT CACCGACCCG
ATCCTCATCC TGACGGGCGG CGAGCCCCTC ATGCGCAAGG ACATCTGGGA GATCATCGAC
TACGCCCATG AGAAGGGCCT GCACCCGGTC ATCGGCACCA ACGGCACGCT GATCGACGAC
GAGACCGCAA AAAAGATCGC CGAACACGGC ATCCCGCGCG TGTCGGTGTC CATCGACTTT
CCCGACGCTG AGGGCCAGGA CGCCTTCCGC GGCGAGAAGG GTGCCTTCGA AGGCACCGTC
GAAGGCATCA AGAACCTGCA GAAGCACGGC GTGGGGGTGC AGATCAACAC CACCATCACC
AAGATGAACA ACCTGCTGGT GGACGACATC CACGACCTGG CACAGGAGCT GGGCGCGGTG
GCGTTCCACC CGTTCTTGCT GGTGCCCACG GGCCGCGGCG AGGACCTTAT CGACGTTGAA
CTGACGCCCG ACGAGTACGA AGAGGTTCTG ACCTGGGCCT ATAACCGCCA CAAGACCTCG
CCCATGCATT TCAAGCCAAC GGACTCGCCC CAGTACTACC GCATCATGCG CCAGCAGGCG
GCCCTGGACG GCATCAAGGT GACCCCCGAG ACGCACGGCA TGGAGGCCAT GACCCGCGGC
TGCTTGGGCG GCATCAGCTT CGTCTTCATC AGTCATGTGG GCGACGTGCA GCCCTGCGGC
TACTTCGACA TGCAGCTGGG CAACGTGAAG GAAACCCCGT TCTCGGAGAT CTGGACCAAT
TCGCCGGTCT TCGATGACCT GCGTCATTAC GACCGCCTCA AGGGCAAGTG CGGCGCCTGC
GAATACAAGA GCGTGTGCGG CGGATGCCGT GCCCGCGCGC TGTCGCTGTA CGGCGACTAC
CTGGAGGAAG AGCCCTATTG CGCCTACGTG CCCCGGAAGT TCGCCGAGGA CCGCGTCATG
GATATCATCC AGACCGGGTT CCCGGTGTGC GAAAACCCGT ATGCATCCAT GGCGGAGCGT
CTCGGCTTCC ACGAGGAGGA CGTGCGCGGG GCCGTGGAGC GCCTGTACAA GAAGGGGACG
ATCCGCCGCA TCGGCGCCAG CTTCGCCGCG GCCAAGCTGG GTTACGTCTC CAGTCTGTGC
GCCATGCGCG TGCCCGAGGG CCGCGTGGAC GAGGTTGCTG CTGTCGTGAG CGAATATCCC
CAGGTCACCC ACAATTACCT GAGGAATTCC GAATACAACC TGTGGTTCAC GGTCATCGCC
CGCGACCTGC AGGTCAAGCG CGACATCCTG GCTGCGATCG AGTCCGCCTG CGGCCTGCCC
GTGCTGGACA TGCCCGCCAG CAAGACCTAC AAGATTCGCG TGGATTTGAA GAAGGGCGCG
GGCTCCAGCT ACAAGAAGCC CCGCTCGCTT AAGGCCGCTC AGGACGAGGC GGCCCGTCCC
TCCGCGGATG TGGCGCCGAC CTACGAGCCG GGCCCGGCTT TCGATCCGTG CGACCCCTTC
GACGTGGAGC TCGTGCGCTG GTCGCAGGGC GACATCGCCC GAGTCGGCGG CAAGCTGGTT
GACGCCCCGT ATGCCGAGGG TGCCCGGCAG CTGAGCGAGG CGCTGGGCCG CGAGGTGACG
GAAGCGCAGG TCATCAAGCG TTTAGGCGAG TTTGCCGGCA ACGGCGAGGC CCGGCGTGTG
GGTGCCATCG TGCGCCACCG CAAGATGGGT TTCTCCGTCA ACGGCATGAC GGTCTGGAAC
GTTCCCGACG AACAGGCCGA CGCCGCTGGC GCGGTGCTTG CCGCAAGCCC GCATGTGTCG
CATTGCTATG CTCGTCCGCG GACGGGCGGC TGGAACGCCA ATCTGTATGG TATGGTGCAT
GCGCAAAGCG ACGAGGAGAT GGCCGCCTTC GCGGCGGAGC TCGCTGCGGC GCTTACGGAC
GCCGGCGTGG ACTTCGAAGG TCCGCAGGTG CTGGTGTCCA CCAAGGAGTT CAAAAAGACG
TCGATGAAAT ACTTCGACGA GGCCGAATAG
 
Protein sequence
MEHEKKHPGG HPGGIPLKHP AGIPKTGKMP EWVKKMLAEG DKSSMSGRRG YRPGAGPAAQ 
AYEERTGIKA PKIVAWEITR SCNLACAHCR AAAHCTPYPG ELSLDECKAV MDDIASITDP
ILILTGGEPL MRKDIWEIID YAHEKGLHPV IGTNGTLIDD ETAKKIAEHG IPRVSVSIDF
PDAEGQDAFR GEKGAFEGTV EGIKNLQKHG VGVQINTTIT KMNNLLVDDI HDLAQELGAV
AFHPFLLVPT GRGEDLIDVE LTPDEYEEVL TWAYNRHKTS PMHFKPTDSP QYYRIMRQQA
ALDGIKVTPE THGMEAMTRG CLGGISFVFI SHVGDVQPCG YFDMQLGNVK ETPFSEIWTN
SPVFDDLRHY DRLKGKCGAC EYKSVCGGCR ARALSLYGDY LEEEPYCAYV PRKFAEDRVM
DIIQTGFPVC ENPYASMAER LGFHEEDVRG AVERLYKKGT IRRIGASFAA AKLGYVSSLC
AMRVPEGRVD EVAAVVSEYP QVTHNYLRNS EYNLWFTVIA RDLQVKRDIL AAIESACGLP
VLDMPASKTY KIRVDLKKGA GSSYKKPRSL KAAQDEAARP SADVAPTYEP GPAFDPCDPF
DVELVRWSQG DIARVGGKLV DAPYAEGARQ LSEALGREVT EAQVIKRLGE FAGNGEARRV
GAIVRHRKMG FSVNGMTVWN VPDEQADAAG AVLAASPHVS HCYARPRTGG WNANLYGMVH
AQSDEEMAAF AAELAAALTD AGVDFEGPQV LVSTKEFKKT SMKYFDEAE