Gene Shel_11110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11110 
Symbol 
ID8395002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1266616 
End bp1267332 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID644985869 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003143495 
Protein GI257063823 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0035018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0238039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTATC TGGAACATTT GGAGCATGCG GGGCATGAGA AGCCGGGCCG CAGCAACGAG 
GCGCCGGTGC TGATCGAGTT CGACCATGTG AGCTTCGGGT ACGAGGACGA ACCGGTGCTC
GACGACGTGT CGTTCGCGAT TCGGCAGGGA CAGGCCGTGG CGCTGACCGG GCCCAACGGG
TGCGGCAAGT CGACGGCGTT GCGCCTGATC AACGGGCTGC TGTTCGCCAA GTCGGGGGAG
TATCGCTTCG ACGGGCAGAA GGTTGACGCC GCCGCCATGA AGAACCAGAC GTTTGCGAAA
CGGCTGCACC AGCGCATCGG GTTCGTGTTC CAGAACCCCG ACACGCAGCT GTTCTGTCCC
AGCGTGCAGG AGGAGATCGC CTTCGGACCG CGGCAGATGG GGCTTTCCGA GGAGGAGGTC
CAGCGTCGGG TGGACGACAT GCTGGACATG TTCGACCTGC GCAAACTGGC GAAGCGTGCG
CCGTACCGCC TGTCCGGCGG CGAGAAGCAC AAGGTGGCCA TCGCCTGCGT GCTGTCGATG
AACCCGGATG TCATCGTGCT GGACGAGCCC ACCAACGGGC TGGACCAGAA GACCCAACGG
CTGCTCACGC GCACGCTGCA CGATTTGAAT TTCGCTGGGA AGACCGTGGT GCTTTCCACC
CACGACCATG ATCTGGTGAT GGACCTGGCC GCCCGCGAAC TCCGCATGCG CGGCTAG
 
Protein sequence
MEYLEHLEHA GHEKPGRSNE APVLIEFDHV SFGYEDEPVL DDVSFAIRQG QAVALTGPNG 
CGKSTALRLI NGLLFAKSGE YRFDGQKVDA AAMKNQTFAK RLHQRIGFVF QNPDTQLFCP
SVQEEIAFGP RQMGLSEEEV QRRVDDMLDM FDLRKLAKRA PYRLSGGEKH KVAIACVLSM
NPDVIVLDEP TNGLDQKTQR LLTRTLHDLN FAGKTVVLST HDHDLVMDLA ARELRMRG