Gene Shel_11100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11100 
Symbol 
ID8395001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1265699 
End bp1266526 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID644985868 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003143494 
Protein GI257063822 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00108743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.024314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCG ACTGGCTTGA ACAGCCGCAA GACTACACGC CTCGGAAGGA CCGCGACGTC 
TTTCTGAGGC GTAATGCGTT GCAGCTCACG TCCATGCTGT CGCGCGTGAA GATGCAGCGC
GGCGGCCTGG ACGACGACAG CCTGTCGGTG TTGGATAGGC TGCTGATTTG CGTCGACCCT
GCGTTGCGCA TCGCGGGCAT CATCCTGGTC ATTCTGCTGA ACGCGGCTTC TACCAACATG
TTCTTCACCT ATTGCGTAGC CGCAGGCGTG CTGGGCATTC TGGCGCTCAA GCGCGGCGAA
GACGTCGTGG ACGTGGTGAA ACCTGCGTTG GGAGGCGCTG CCTTTACGGC GCTCATCATG
CTGCCTGCGG TGTTTCTGGG GCAGCCCCAG TCGATGGTGC GCATCACTTT GAAGGTGTTT
CTGTCGGTGG TGCTGCTGGC GAACCTGGCT CGCGGTGTGG CGTGGAACGA GCTGGTTGCA
GGCCTGCGGT TCTACCATGT ACCGTCGATT TTCGTGTTCA TTTTCGACAT CACCATCAAA
TACATCGTGC TATTGGGCGA GACCGCCCAA AGCGTGCTTG AGGCGCTGGC GCTGCGCAGC
GTGGGGTCGA ACCGCGACAA GAGCGGCTCG GCGTCGGCCG TCATGGGCGT GACGTTTCTG
AAGGCGCAGG ATTACGCCCG CGAGATGTAC CAGGCCATGG AGTGCCGCGG GTTCGTGGGC
GACTACCTGT CGCCGCGCCA TAGGGTGTTC AATCCTGCGG GCATCGCATA TCTCCTGGTC
ATGGCGGCGC TGGTGGTGTG GTTCTTCTAT CTAGAGGGGG CAATGTGA
 
Protein sequence
MIPDWLEQPQ DYTPRKDRDV FLRRNALQLT SMLSRVKMQR GGLDDDSLSV LDRLLICVDP 
ALRIAGIILV ILLNAASTNM FFTYCVAAGV LGILALKRGE DVVDVVKPAL GGAAFTALIM
LPAVFLGQPQ SMVRITLKVF LSVVLLANLA RGVAWNELVA GLRFYHVPSI FVFIFDITIK
YIVLLGETAQ SVLEALALRS VGSNRDKSGS ASAVMGVTFL KAQDYAREMY QAMECRGFVG
DYLSPRHRVF NPAGIAYLLV MAALVVWFFY LEGAM