Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_11100 |
Symbol | |
ID | 8395001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1265699 |
End bp | 1266526 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985868 |
Product | ABC-type cobalt transport system, permease component CbiQ |
Protein accession | YP_003143494 |
Protein GI | 257063822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00108743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.024314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCCCG ACTGGCTTGA ACAGCCGCAA GACTACACGC CTCGGAAGGA CCGCGACGTC TTTCTGAGGC GTAATGCGTT GCAGCTCACG TCCATGCTGT CGCGCGTGAA GATGCAGCGC GGCGGCCTGG ACGACGACAG CCTGTCGGTG TTGGATAGGC TGCTGATTTG CGTCGACCCT GCGTTGCGCA TCGCGGGCAT CATCCTGGTC ATTCTGCTGA ACGCGGCTTC TACCAACATG TTCTTCACCT ATTGCGTAGC CGCAGGCGTG CTGGGCATTC TGGCGCTCAA GCGCGGCGAA GACGTCGTGG ACGTGGTGAA ACCTGCGTTG GGAGGCGCTG CCTTTACGGC GCTCATCATG CTGCCTGCGG TGTTTCTGGG GCAGCCCCAG TCGATGGTGC GCATCACTTT GAAGGTGTTT CTGTCGGTGG TGCTGCTGGC GAACCTGGCT CGCGGTGTGG CGTGGAACGA GCTGGTTGCA GGCCTGCGGT TCTACCATGT ACCGTCGATT TTCGTGTTCA TTTTCGACAT CACCATCAAA TACATCGTGC TATTGGGCGA GACCGCCCAA AGCGTGCTTG AGGCGCTGGC GCTGCGCAGC GTGGGGTCGA ACCGCGACAA GAGCGGCTCG GCGTCGGCCG TCATGGGCGT GACGTTTCTG AAGGCGCAGG ATTACGCCCG CGAGATGTAC CAGGCCATGG AGTGCCGCGG GTTCGTGGGC GACTACCTGT CGCCGCGCCA TAGGGTGTTC AATCCTGCGG GCATCGCATA TCTCCTGGTC ATGGCGGCGC TGGTGGTGTG GTTCTTCTAT CTAGAGGGGG CAATGTGA
|
Protein sequence | MIPDWLEQPQ DYTPRKDRDV FLRRNALQLT SMLSRVKMQR GGLDDDSLSV LDRLLICVDP ALRIAGIILV ILLNAASTNM FFTYCVAAGV LGILALKRGE DVVDVVKPAL GGAAFTALIM LPAVFLGQPQ SMVRITLKVF LSVVLLANLA RGVAWNELVA GLRFYHVPSI FVFIFDITIK YIVLLGETAQ SVLEALALRS VGSNRDKSGS ASAVMGVTFL KAQDYAREMY QAMECRGFVG DYLSPRHRVF NPAGIAYLLV MAALVVWFFY LEGAM
|
| |