Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10860 |
Symbol | |
ID | 8394977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1240553 |
End bp | 1241038 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644985844 |
Product | hypothetical protein |
Protein accession | YP_003143470 |
Protein GI | 257063798 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.405906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000176552 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGCGACG TCAATCCTGA ATATGTCGAA CGCCTGATGG AGTTCATAAA TGCGAGTCCG TTCGCCATGG AGCACAACTT CAAAGTGGAG GAGATGCGTC CTGGCTACGC CCGAGTGGTG GCGGAGCCTG ACGGGCGGTT CCTCAATCCC ACGGGCGGCC TGCACGGCGG CTATTACTCC TCGCTGGTCG ATACCGCCAC GGGTTACGCC ACGTTCCTGC TGCATACCGA GGATGTGGGC ACCATCACGC TGGATGTGAA CGTGACCTAC GCGAAGCCTT TCAAAACAGG CAAGATCATC GCGGAGGGCA ACGTCATCAA AGTAGGCACC AAGGTAGACA TGTCGGAATG CGTCGTTCGT GACGAGGAGG GGAGGCTTCT GGCCAGCGGA TCTTCGAACC TGATGATCAT TCCCGGTGTG CAGATCATGG AGGACTGCGT CGTCGAATCG GGTCGTCCGC CCATGCCCCC GAAGTTCCTA GATTAA
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Protein sequence | MRDVNPEYVE RLMEFINASP FAMEHNFKVE EMRPGYARVV AEPDGRFLNP TGGLHGGYYS SLVDTATGYA TFLLHTEDVG TITLDVNVTY AKPFKTGKII AEGNVIKVGT KVDMSECVVR DEEGRLLASG SSNLMIIPGV QIMEDCVVES GRPPMPPKFL D
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