Gene Shel_10680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10680 
Symbol 
ID8394959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1222026 
End bp1223435 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content65% 
IMG OID644985826 
Producthypothetical protein 
Protein accessionYP_003143452 
Protein GI257063780 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0331666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000019821 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCTGAAG CACCGCAGTT CGGAGCCATC CTGCGCCAGG CGCGCGAAGA CTCCGGTGAA 
GATCTGAACA CCGTTGCACG GCGTATCCGC ATCCGTCCGG ACATCCTCGA ACGCATCGAG
GAGTCCGACC TGGACGGCAT GCCGCCCCGC GGGTATTCCC GCAATATGAT CAACGCATAC
GCCCGCTACC TGGGTTTGAA TCCCACGGAG CTGGTTAAGA TGTATCTGGA CGCGCAGTAT
GCGCACCAGA TCGACAAGGC CCGCGCGAAC ATCCGTCCCT CGGGCTTCAA CATGGACACG
GGGCGCACCA TGCGCGAGCG CCACGAGCTG TCTAACCAAG TGGGGGTGGG AGCGCCCGCG
TCCCATTCCT CCTCGCACGT GCGCCGCAAC GAGTCCTTCG AGGACCTGTT CCCGAGCTAT
GGCGAAACCG GCGGACGCCT GTCATCCTCC GGTGCCGGCG CCTATTCCGG AAGCTCCGCT
TCGACCCGCT CGCTGGACAG CGCCATCACG TCCCGCGGCG CCTCCAGCGG CCTGGGCTCG
GTGCATGTGG GCTCCTGCAA CGGGTACGGC GACGGCCTTT CCCGCCGCCG TTCGCAGTCC
GAAAGCAGCC TGACCCGCAC CATGGAGCGC GTGCCGCAGA ACGGTCGCCG TTCCCGTCGC
GACAACGACC TGGGCGAACA GCCTTATTCC AACACGACGT GGTATGCCAA CCAGCAAAAC
GGGTTCGACC TGCGCAGCAA GCTTCCCTTC ATTCTGGCGG CCATCATCAT CCTGCTGCTG
GTAGTGGTCA TCGCCGTGGT GGTCCAGTCC AGCAAGGCGC CGGCGGAAAC CGACGACCAG
ACCACCATGA ACATCTCCGG CATGCCTTCC TCATCCACCA GCACGTCGGA CGACAAGGAA
GCCGACAGCG AGAAGGATGC GGCGGCCGAG GAGGAGAAGG CCGAAGAGCC CGCCGAGGTC
GCACCCACCG AAACGGTCAT CAAGCTGTCC ATTCCTGAGG AGGAGACCGC CTACGTCGAG
GTGTACGAGG GTCAGACCTA CAGCGAATCC AACGGGGAAT CCCGCACGGC TGCGGAAACC
TTCACGGGTC CCTACGAGCA GACGTTCAAC GTGAACACCA CGTTGCAGAT CGTGACCACC
AATCCCGACG GCGTGTACGT GACGCAGGAT GACGAACAGG TGAGCTGGGA GGATTACGGC
AGCGGCGTGT ACGGCGTCAC CTTCCGCTTC GAGGACGTGC TCAAGGCCTG GAACGAGGCC
CACGGCATAA CCACGGCGGC GGCCGAGACG ACGGATGCGC AGTCTGCCGA ATCGGGCGAG
GCCGCAGAAG GCGAGGCGGA GCAGCCCGTC GAGACCACGG CGGAGGAGAC CGCCGAAGCG
TCTGCGGACG AATCCGCAGA GGTCGCATAG
 
Protein sequence
MAEAPQFGAI LRQAREDSGE DLNTVARRIR IRPDILERIE ESDLDGMPPR GYSRNMINAY 
ARYLGLNPTE LVKMYLDAQY AHQIDKARAN IRPSGFNMDT GRTMRERHEL SNQVGVGAPA
SHSSSHVRRN ESFEDLFPSY GETGGRLSSS GAGAYSGSSA STRSLDSAIT SRGASSGLGS
VHVGSCNGYG DGLSRRRSQS ESSLTRTMER VPQNGRRSRR DNDLGEQPYS NTTWYANQQN
GFDLRSKLPF ILAAIIILLL VVVIAVVVQS SKAPAETDDQ TTMNISGMPS SSTSTSDDKE
ADSEKDAAAE EEKAEEPAEV APTETVIKLS IPEEETAYVE VYEGQTYSES NGESRTAAET
FTGPYEQTFN VNTTLQIVTT NPDGVYVTQD DEQVSWEDYG SGVYGVTFRF EDVLKAWNEA
HGITTAAAET TDAQSAESGE AAEGEAEQPV ETTAEETAEA SADESAEVA