| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10610 |
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| Symbol | |
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| ID | 8394952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1210340 |
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| End bp | 1212340 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985819 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003143445 |
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| Protein GI | 257063773 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000342389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAACG AATCACGCAT ACAGGACATC AAACATCAGC TGGCAAGCGT TCCCACGCTG
CCGGGCGTAT ACCTATGGAA GAACAAGGAC GGCGAGGTCA TCTACGTAGG CAAGGCCAAG
CAGCTGCGGG CCCGCATGCG CCAGTACGTG AATTTCCAGG ACGACCGCGC CAAGATCCCG
CTGCTCGTGG ACCAGATCGA TTCCTTTGAA TACATCGTCG TCGAAAACGA GCACGAGGCG
CTGGTGTTGG AGAAGAACCT CATCAACCAG TACGCTCCGT TCTTCAACGC GGACTTCAAA
GACAACAAGA GCTATCCGTT CATCGCGCTG ACCAAAGGCG ACGTGTTCCC GGCCATCAAA
TACACCCGTG AGAAGCATGT GGCTTCCACC CGGTATTTCG GGCCGTACAC GGACGGACGT
GCGGCGCGCC AGCTGGTGGA CATCGTCCGC AAGGTCGTGC CGCTGTGCTC GAGCTCCTGT
GCGGAGTGGC GCCGTCTGAA GAAGAAGCTC GATAATGACG ATTTGACGGC GTTCCTGTCG
GAGACCGGCA CCCGGCCCTG CTTCGACGCC CATGTGGGAT TAGGCCCCGG CGCCTGCTGC
GGGCAGATCA CGCCCGAGGA CTACCGCAGG CACGTCGAGC GCGTGGAGAA GTTTCTGTCA
GGCAGGCGCA CCGAGTTCAT CGAGGAGCTG ACCCAGGAGA TGATGGAGGC GGCCGCGGAT
TTGGATTTCG AACGCGCCGC ACGTCTCAAA TCAAGGATTG ACACCATCAA CTCGCTTACG
GACCGCCAGC ATGCGGTGTC GTCGCGCAAT CTGAACGCCG ATGTGGTGGG CATCCACCGC
GAGGAGACCA TCGCGGGCGT CCACGTGTTC ATGATACGTG AAGGCCGCAT CATCAACAGC
AACGAGTTCG TGCTGGACCG CGGCAGCGAC GTGCCCGACG AGGACCTGCT GCATACGTTC
CTGCTGCGCT ACTACGACGC CACCACGTCC ATTCCCCACG AGGTTATCGT GGAGCGCGAG
CTGGAGGACT CCGATGCCAT GGAGGAGTGG CTGACGGGAA AGCTGGCCAG CAAGTTCGGC
GCGAAGGTGC ACCTTACGGT GCCTGCCCGC GGCGAGAAGG CGGAGCTGCT GGAAATGGCC
CGCAAGAACG CCTCCCACAC GCTGAACCGC TACAAGGTCC GTACCAACTA CGAGGACAAA
CGGGTGAACG CCGCCCTGCT GCAGCTGGAA AGCGCGCTGG CGCTGGATGA GCCGCCCATG
CGCATCGAGT GCTTCGACAT CTCCACCATC CACGGCTCCT ACACGGTGGC CTCCATGGTG
GTGTTCACCG ACGGGCGTCC CGACAAGGGA CAGTACCGCC GCTTCAAAAT CAAGACGCCT
TTGGACGAGG CCGACGACTT CCTGAGCATG CGCGAGGTCA TCGGGCGGCG CTACGCCCCC
GAGCGCATGG CGGATACGCG GTTCGGCAAG AAGCCCGACC TGCTCATCCT GGACGGCGGT
CTGCCTCAGC TCAATGCGGT GCTCGACCAG TTCGAGGAGA TGGGCATTAA CGACATTCCC
GTGTGCGGCC TGGCCAAACG CGACGAGGAG CTGTTCGTCC CCTGGCAGCA GACAGGTCCT
GTGGTGCTGC CGGGCGGCTC GGCCTCGCTG TATCTGGTCA AGCACGTCCG CGACGAGAGC
CACCGCTTCG CCATCACCTT CCACCGGGAG CTTCGCGGCA AGGGCATGAC CAAATCCATC
CTCGACGACG TGGTGGGGCT CGGTCCCGTT CGCAAGAAGG CCCTGCTCAA ATCCATGGGC
GGTTTCAAGA AGCTTCGCGC TGCCAGCCTG GAGGAGATCA AGGCCACCAA GTCGGTCCCC
GCTGAGGTGG CCGAAGAGGT CTACGCGGTC CTAAGGCAGT ATAATGAGAA ACGAACGACC
GATATTTCAG AAGGGCTCGG GGAAGATCCT GTTCTGCAGG GCGAATCCGA CGGGTCCGGC
ACTGACGACG TGCTTGAATA G
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| Protein sequence | MANESRIQDI KHQLASVPTL PGVYLWKNKD GEVIYVGKAK QLRARMRQYV NFQDDRAKIP
LLVDQIDSFE YIVVENEHEA LVLEKNLINQ YAPFFNADFK DNKSYPFIAL TKGDVFPAIK
YTREKHVAST RYFGPYTDGR AARQLVDIVR KVVPLCSSSC AEWRRLKKKL DNDDLTAFLS
ETGTRPCFDA HVGLGPGACC GQITPEDYRR HVERVEKFLS GRRTEFIEEL TQEMMEAAAD
LDFERAARLK SRIDTINSLT DRQHAVSSRN LNADVVGIHR EETIAGVHVF MIREGRIINS
NEFVLDRGSD VPDEDLLHTF LLRYYDATTS IPHEVIVERE LEDSDAMEEW LTGKLASKFG
AKVHLTVPAR GEKAELLEMA RKNASHTLNR YKVRTNYEDK RVNAALLQLE SALALDEPPM
RIECFDISTI HGSYTVASMV VFTDGRPDKG QYRRFKIKTP LDEADDFLSM REVIGRRYAP
ERMADTRFGK KPDLLILDGG LPQLNAVLDQ FEEMGINDIP VCGLAKRDEE LFVPWQQTGP
VVLPGGSASL YLVKHVRDES HRFAITFHRE LRGKGMTKSI LDDVVGLGPV RKKALLKSMG
GFKKLRAASL EEIKATKSVP AEVAEEVYAV LRQYNEKRTT DISEGLGEDP VLQGESDGSG
TDDVLE
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