Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10540 |
Symbol | |
ID | 8394945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1200775 |
End bp | 1202304 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985812 |
Product | predicted ATPase (AAA+ superfamily) |
Protein accession | YP_003143438 |
Protein GI | 257063766 |
COG category | [R] General function prediction only |
COG ID | [COG1672] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000147633 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000237286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTTTTA TCGGTCGTGT TCAAGATCTT GAGTATCTGG AGACCTTCTA CGAAGCGGAC GGCCCTCAGT TGGTCGCCGT CTACGGTCCG CGCCATATCG GCGTGAGCGA AATGCTGAAG CGGTTCTCCT ACGGCAAGAA GTGCGTGTAC TACGCCGCCC AGGAGCAGGT GGCCCAGCGC CAGGCACGGG ATTTCGCGAA ACGTTTCAAT TCGCAAATTG ATAACGTCGA AACCTGGAAG GACGCCCTTG CACAGTGCAT CGGCCAATAC GATGGTGAGC AGAAGCTGGT CGTTCTCATC GACGGTCTGG GGGCCGTCGT CGCATCCGAC CCCTCCTTCT TGGACGGGTT GGCGGACCTG CTTACGGTGC AGCTGTCGCA GGCCGACGTG CTTATCGTTT TGGCAGGGCA CAGCATCGAG CTTTTCGAGA GGCATGTGCT TGCCGAAGAC GGTCCGTTGG GAGAGTTGGT CGGCGGGTCG GTTCGCCTTG GTCCTTTGAG CCATTGGGAA TCCGAGTCGT TCTTCCCGAA ATACGAAGCC GCCGACAAGG CGCTCATGCA TGCGGTTCTG AACGGCTCGC CCCATTACCT CGCCATGGTC GATCCGTCGG TTGATGCGTC CGAGAATATC AAACGTCTGG TGCTCGAGCG CGGTTGCCTG CTTGAAAACG AGACTGAGCT CATCCTGCAT CAGGACTTCC GAGAGGTGGC GACGTACAAT GCGATTCTTG AGGCTTTGGC TTCGGACGCC ACCCAGTTTT CCGGGCTTTC CGAACAGACG GGTGTGGAGA AACGCAAGCT GAGCGTGTAC GTGAAGAACC TCGTGGACGC CGGCCTGGTG GAGCGCGTCT CGCCGGTGCG CAAGCCCGAT GCATCCGGTA AGCGCCAGGG TGATGCCTCC CGCAACTCCC GGAGCGAATA CCGCCTGGCA TCCACGTTCC TTCGTTTCTG GTACGCCAAT GTGGTGCCAT CCAAGAGCGA TCTGTCTTTC GGCGACATCG AGAACGTGTA CCGGACGAGC ATCGTGCCGC GCATGAACGC ATATCTCAAG GACCCGTTGA CCACCATGGT CAAAGCGTGG ATTGAACGGG CGAACGCCCT GGGCCTTCTG TCCAAAGAGG TGGGGGAGGT AGGTCCCGCG TGGAAGACCG ACGCCAATGT CGATCTGGTG GGATACTCCG AAGACGGGTC GTATGCCGTG GCGGCAATCG TTCAGGTACA GGACGGAAAG ACCGGAAGCG CCGACATCCC GTCGGTCGAC GAGGTGCGCG ATGCGCTGCA GGTGGAAACC GTCAGCCTGT TCGTGTTCGC CATGGACGGT TTCACCGGGG AGCTTAAGGC GCATGTCGAA GACACCGGCG AGCTGACACT GCTTACCGTC GACGACCTGT ATGCCGAAGC GAAGGAGCCT ACGGTGGTCG TGAAGGAGCG CCGTCCGGCG CCTGCGGCCA AGCCGAAGAA GGCGCTGCCG TTCGTGGTGG AGGATGATCA GCCACGCAAC ATTCGCGGCT ACTATGCCGA GCGGCGTTAG
|
Protein sequence | MAFIGRVQDL EYLETFYEAD GPQLVAVYGP RHIGVSEMLK RFSYGKKCVY YAAQEQVAQR QARDFAKRFN SQIDNVETWK DALAQCIGQY DGEQKLVVLI DGLGAVVASD PSFLDGLADL LTVQLSQADV LIVLAGHSIE LFERHVLAED GPLGELVGGS VRLGPLSHWE SESFFPKYEA ADKALMHAVL NGSPHYLAMV DPSVDASENI KRLVLERGCL LENETELILH QDFREVATYN AILEALASDA TQFSGLSEQT GVEKRKLSVY VKNLVDAGLV ERVSPVRKPD ASGKRQGDAS RNSRSEYRLA STFLRFWYAN VVPSKSDLSF GDIENVYRTS IVPRMNAYLK DPLTTMVKAW IERANALGLL SKEVGEVGPA WKTDANVDLV GYSEDGSYAV AAIVQVQDGK TGSADIPSVD EVRDALQVET VSLFVFAMDG FTGELKAHVE DTGELTLLTV DDLYAEAKEP TVVVKERRPA PAAKPKKALP FVVEDDQPRN IRGYYAERR
|
| |