| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10210 |
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| Symbol | |
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| ID | 8394912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1163770 |
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| End bp | 1164849 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985779 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003143405 |
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| Protein GI | 257063733 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0367242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000704574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCCGGA CGGACGGCAA CGGCAATTCG GTCGTACATG TGGCAACGGG CGAGCAATAC
GACGTGACGA TTGGGAAGGG GCTCATCGGT CGGGTGGCAT CGTTTGTGCC CAGTTTGGAG
AAGGTGTCCC GTGTGGCCGT CGTTACCGAC GATGTTGTGG AAGGGCTGTT TCTGGGCGAT
GTGACGGACG GCCTGAAGCG TGCGGGGTTC GAGGTGTCGG CCTTCGCGTT TCCGGCAGGT
GAGCCCAGCA AGAACATCCA TACCTTCGCA GCCGTGCTCG AGCATCTTGC GGAGCACCGT
ATGACCCGAA ACGACATGGT GGTGGCCTTG GGCGGCGGCG TAGTCGGAGA CGTTGCGGGA
TTCGCGGCGG CATCGTACAT GCGGGGCTGC CCCTACGTGC AGGTGCCCAC GACCATGCTG
GCGGCCGTGG ATTCCAGCGT CGGCGGCAAG ACCGCCATCA ACCTGCAGGC GGGAAAGAAC
CTCGCCGGCG CGTTCTACCA GCCGTCGGCC GTCGTATGCG ACATCGACTG CATCGCTGCG
CTGCCATCGG GCGAATTCGC AAACGGCATG GCAGAGTCCC TCAAATACGG CGTGCTCTGC
GACGCCGGTC TGTTCGACGA TCTGGGCGAC AATCCCCGCG ACCACTTGCA GGAGCTCATC
GCACGCTGCG TGAACATCAA ACGACGCTAC GTGGAGGCCG ACGAGCATGA AGGCGGGCTG
CGCAAGTTTT TGAACCTGGG GCACACCTTC GGCCATGCCA TTGAGAAATG CAGCGGATAC
GCGGTGCCCC ACGGCAGTGC GGTTGCCATA GGCATGGTCA TGGCGGCGCG GGTGTCGGCA
TCGCGCGTCA TGGCTGACCA GGCCTTGGTC GACCGGCTTG CACGCGCCCT TGAGTCGGCG
GGCCTGCCGA CATCGACCGA CATTCCGGCT GAGGAGCTTG CCTGGGCCGC GCAATCGGAC
AAGAAGCGTT CCGGCGACAC GGTGACGTTC GTGCTGCCGA AGACGATTGG GAATTGCGAG
CTGGTGGATG TCGGCGTGGC CGAGCTTGGC GGGGTGTTCG AAACCGCCTG CCAGAAATAG
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| Protein sequence | MIRTDGNGNS VVHVATGEQY DVTIGKGLIG RVASFVPSLE KVSRVAVVTD DVVEGLFLGD
VTDGLKRAGF EVSAFAFPAG EPSKNIHTFA AVLEHLAEHR MTRNDMVVAL GGGVVGDVAG
FAAASYMRGC PYVQVPTTML AAVDSSVGGK TAINLQAGKN LAGAFYQPSA VVCDIDCIAA
LPSGEFANGM AESLKYGVLC DAGLFDDLGD NPRDHLQELI ARCVNIKRRY VEADEHEGGL
RKFLNLGHTF GHAIEKCSGY AVPHGSAVAI GMVMAARVSA SRVMADQALV DRLARALESA
GLPTSTDIPA EELAWAAQSD KKRSGDTVTF VLPKTIGNCE LVDVGVAELG GVFETACQK
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