| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10150 |
|---|
| Symbol | |
|---|
| ID | 8394906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1159079 |
|---|
| End bp | 1160167 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644985774 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_003143401 |
|---|
| Protein GI | 257063729 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.107827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000077932 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGCATCGA ACATCGGGAA GAACGTTCGC ATACAGGTTT TCGGGCAGAG CCATTCTGCC
GCCATCGGCG TGACCATCGA CGGAATCCCT GCCGGCAAAC GCATCGATAC GGATGAGCTG
CAGGCGTTTC TGGACCGTCG GGCACCTGGG CGGCTGCCGT GGGTGACCCC TCGGAAAGAA
GCGGACCGCG TCGAGTTTCT GAGCGGCCTT GTCGACGGTG TGACCTGCGG CGCTCCCATC
GGTGCCGTTA TCGCCAACAC CAACACCAGG TCTTCCGACT ACGCCCGTCT CGACCGCGTG
CCCCGGCCGG GCCATGCCGA CTACGTGGCC CGGGAGAAGT ACCACGGCGC CCAGGATTTC
GCGGGGGGAG GGCATTTCTC CGGACGTCTG ACCGCGCCTT TGTGCGTGGC CGGCGGCATC
GCTTTGCAGC TGCTGCGTGA GGAAGGCGTG CGCATCGGCG CGCATCTGGC CCGTGCGGCC
TGCATCGACG ACGCGTGCTA TCCGTTGCAG GGCATTACGG CCGACATGCT GGACGCCGCC
AAGGGAAAGG ACATGCCCGT GCTTGACGAC GCGGCCGGCC AGGCCATGGC CCAGGCCATC
CTTGCTGCCC GTGAGGCCTG CGACTCCGTG GGCGGGGTGG TGGAATGCGC TGCCATCGGC
GTGCCGGTAG GGCTGGGCGA CCCCATGTTC GACGGCGTCG AGAACGTCAT TGCGAAGTAC
TGCTTCGGCA TACCGGCCGT GAAGGGCATC GAATTCGGCG TCGGGTTCGA AGCGGCTGAC
CTGGCAGGTT CCGTCAACAA CGACGCCTAC CGTTTCGAAA ACGGAAAGGT GCGCTTCGAA
AGCAACAACG CAGGCGGGGC CTTGGGCGGC ATCTCCACGG GTGAACCCGT GGTGTTCCGC
CTGGCTTTCA AGCCCACGCC TTCCATATCC GGCGTGCAGC ACAGCGTGAA CCTGGACACC
GGGCAGAACG AAGACCTGTC GGTCCGCGGC AGGCACGACC CCTGCGTGGC CGTGCGCGCG
GTTCCCGTGG TCGAGGCCGT GTGCGCGCTG GCCCTGTACG ACATGATGCT GGAATCGAGG
ATGCGATGA
|
|---|
| Protein sequence | MASNIGKNVR IQVFGQSHSA AIGVTIDGIP AGKRIDTDEL QAFLDRRAPG RLPWVTPRKE
ADRVEFLSGL VDGVTCGAPI GAVIANTNTR SSDYARLDRV PRPGHADYVA REKYHGAQDF
AGGGHFSGRL TAPLCVAGGI ALQLLREEGV RIGAHLARAA CIDDACYPLQ GITADMLDAA
KGKDMPVLDD AAGQAMAQAI LAAREACDSV GGVVECAAIG VPVGLGDPMF DGVENVIAKY
CFGIPAVKGI EFGVGFEAAD LAGSVNNDAY RFENGKVRFE SNNAGGALGG ISTGEPVVFR
LAFKPTPSIS GVQHSVNLDT GQNEDLSVRG RHDPCVAVRA VPVVEAVCAL ALYDMMLESR
MR
|
|---|
| |