| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10080 |
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| Symbol | |
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| ID | 8394899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1148792 |
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| End bp | 1152316 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644985767 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003143394 |
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| Protein GI | 257063722 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.503151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000182837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATCTGA AATCGCTCGT CCTCAAGGGC TTCAAGTCCT TCGCCGATCG CCAGGTCATC
TCGCTTGAAC CCGGCATTAC GGCAATCGTG GGCCCCAACG GCTCGGGTAA ATCGAACATC
TCCGATGCCG TGCTGTGGGT CCTCGGCGAG CGCAACCCCA AGCATCTGCG CGGCCAGGCC
ATGGAAGACG TCATCTTCGC AGGCTCTTCG GCGCGCAAGA GCGTGGGCGT CGCCGAGGTC
GAACTGGTTC TGGACAATTC CGACGGCACC CTGCCCGTCG ACTACGCCGA GGTGTCGCTG
ACCCGCCGCA TGTACCGTTC CGGCGAAAGC GAATACCTCA TCAACGGGGC TCCCGCCCGC
CGCATGGACT TCATGGACAT CCTCCATGAC ACCGGCCTGG GCACGGGTAC CCATTCCATC
ATCGGCCAAG GCAATCTGGA CGCCATCCTG TCCAGTAAGC CCATCGACCG CCGGGCGCTC
ATCGAGGAGG CGGCCGGCGT TCTGAAGCAC AAGCAGCGCA AGGAGCGTTC TGCCCGCAAG
CTGGCATCCA TGGACAACCA CCTGCTGCGC GTCAAAGACG TGGCGGCCGA GGTGGAGCGG
CAGCTGAAGC CCCTCGCCCG CAAGGCGAAG CGCGCCGAGG CCTACCAGGG GCTGTCTAGC
GAGCTGGCCC AGCTGAACCT GCTTTTGGCC GTGGACGACC TGCGCCGTCT GCAGCGCGCC
TGGGACGGCG CTCTGAAAGA GGAGACGGAA GCGGCCGCGC TTATCGACGT GAAGCGGTTC
GAGCTGGAGC AATCCAATGA GAAGCTGGAG AAACTCCAGG TCATGCTTCA GGAGAAGGGC
CTGTACGTAG GCGATCTGAC GGAGCGCCGC GGCAGGTTCC ATATGGTGGT CGAACGCATC
GACTCCGCCG ACATGATTCT GTCCGAAAAG GCCCGCTCCA TCGCAAGCCG CCTGGAAAAC
GCCCGCAACA CCTCCTCGGG TTCGGCGCGG CGCATCGGCC TGCTTTCCGA CGAGGTGGAT
GAGCTGTCCG CACGCCTCGA CGCCGAAGTG GCCAAGCGCG ACACGTTGGA GACGGAAACC
AAGGAGCTCG AAAGCCGCGT CGCGGTGCTT CGCGCGAACC TTTCCGCCTT CGACACGCAG
GCAGGCGAGG TGCAGACGCG TCTGCGCACC TGCGAGCGCG ACATCGAGAA GAAGAACGCC
GCCTTGGTGA AGATGCAAGA GTCTGCAGCA TCGGCCACGG CGCGACGCAC CATGCTGACG
GAGCGCCGCG CCGAGGTTCT GCAGGACCTC GAGCGAGCCA AGGCCGAGCT GGATACGCAC
TGCCAGGGCA TCGACGCCCA GGCAGCCGAA ATAGAGAAAC TGACCGAGGA CAGCCGCAAG
GCAGCCTTGG AGGCCGATGC GGCCGACAGG GCCGTCAAGG TGGCGCGCCA GGAGCGCAAG
GACGCCCGCG ACGCGCTGCA GTCGCTGCAA GGCGAGATCC GCGCGCTCAA ACAGGTCGTG
CGCAGCATGC AGACCAAAAG CGAAGCGTCG GAGCTCATGA GCCGCCAAGG CTTCGAGCTT
GACGGGGACG CAAAGTCGCT GGCGTCCCTC ATGCGCGTGC GCGACGGGCT CGAGCCGCTG
GTCGAGCGTC TGCTAGGCGA CGATGTCGCC AGCTTGTTCG TGCATGATGC CGACACTGCC
CGAAACCTGG TGAGCGATGT GAACGCCGCC GGTTTGAACG GCGAGGCGTC CGTGCTGTTC
CCTGGAGCGC AGGGCCGCCA TGCGGACGGC GCGCGCCTTC TGGACCGCAT CGACGCCGAT
GCCGATGTCA TGGGCGCGTT GGAATCCCTC ATCGGCGACG TCGTGGTGGT GGACACCGTT
GACGAGGCCT TCGCCGGCTC TGCCGAGGCC GGGGTGCGCT ACCTGACCCG CGACGGCGTG
CTGGTCTGGC CTGGTTCTAA GGCCAGGGTT TTGGGGCGTG TCGAAGAGGG CGAAGGCATG
CTGGCCTACG AGCGCCGCAT CGCCGAGCTT GAAGGCAAGG TGGGCGGCCT GGAAGCCGCG
GTGGCATCTG CGGAAGCCGC CTTGACCGCC GCAGACGAAG ACCTGGAGCG CAAGCAGGCC
ATGAGCCTGG ATCTGGCCCG CACCAGCGCC CAAAAGAAGG GCGACCACGC ATCCGCCCAA
GCCGAACGGG GCCGCCTGGC TGCCCGCGTG GGCACGTTGG AGGCGAACCT CCAGTCCTTG
GGCACCGAGC TTGCCGCCGT GGAATCCAAG CTGTCCGATT CCGACCCGCA GATTGCCGAC
GCCCAGGCGG CTTTGGCCAT CCTGCGTGCG GAACGCGACG AGCTGCAATC GAAATCAGCC
GAGAGCCAAA GCCAGCGCGC GGCGCTGTCC GACGACGTCC AGCAAGCGTC GTCGAAGGCC
TCGGAATCCA AGCTCGCCTT CGCCACATCC AAGGAGAGGG TGTCGTCTCT CATCCGCGAG
CACGGTGAGC GCCGTCGCGA CCTCGACCGG GCCCGCCGGG CCTGCGAGCG CGCCGACGGA
GACATCCGCC TTCTGTCTGC CGCTGAGGCC CGCATTGCCC CGCTGCATGC GATTTTCGCA
AGCCTGAGGG AATCGGCCCA GGCTTACGTG GACGATCTGG CCGGCAAGGC CGCCTTGGAG
CAGAGCAGCT CCGCGGGGCT CAACGACGCC ATCGGCGCCG CACGCACGGC CAGCCGCGAC
GCCCAGAAGC AGCTGGACGA CGCCACCCAG CGCCTCAACG ACATCCGCGT CAGCAAGGGC
AAGTTGGAAG TCCAGGTGGA AGCCGCCATC ACCACGATTG TGGACGAATG CGGCGTGCCC
TTGGACGTGG CCCTGGAAAC CGCCGAGCCC GAAGACCGGG CCACGGCGGA AAGCCGGGCC
TTCGAGCTGC GCCGCAAAAT CGAGCGCATG GGCACCATCG ACTCGTCAGC CGCCGAAGAG
TACGAAGCCA TGAACGAGCG CTACGAGTAC CTATCCTCTC AGATCGAGGA TATGGAGGCC
GCCCGCCGTT CGCTCATGCG CATCATCGAC GCCATCGACG ATCGCATGCA GGAGCAGTTC
AACGCCACCT TCGAGGCGGT CAACGCGAAC TTCTCGGATA TCTTCGCACG CCTGTTCCCC
GGCGGAAGCG GCTCGCTGGA GCTGGTGGAC ACGGGGGAGG GCAGCCCGCA GGGCGTTGAG
GTGAACGCGC AGCCCCGCGG CAAACGCCTC ACCAAGATGA TGCTCATGTC CGGCGGCGAG
AAATCGCTGA CGGCATTGGC CCTGCTGTTC GCCGTATACA AGATTCGCTC CACCCCGTTC
TACATCCTGG ACGAGGCTGA GGCCGCACTT GATGACAGCA ACCTGCGCCG CCTGACGGCG
TACCTGGAGG CGCTGCGCCA CGAGACGCAG CTGATCCTCA TCACCCATCA ACGCCGCACC
ATGGAGATGT CGGATGTGCT GTATGGTGTA TCCATGCAAT CCGACGGCGT CACCAAGGTC
GTGTCGCAGA AGCTCGACCG CGCCTTGGCC GAATCGAAAC GATAG
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| Protein sequence | MYLKSLVLKG FKSFADRQVI SLEPGITAIV GPNGSGKSNI SDAVLWVLGE RNPKHLRGQA
MEDVIFAGSS ARKSVGVAEV ELVLDNSDGT LPVDYAEVSL TRRMYRSGES EYLINGAPAR
RMDFMDILHD TGLGTGTHSI IGQGNLDAIL SSKPIDRRAL IEEAAGVLKH KQRKERSARK
LASMDNHLLR VKDVAAEVER QLKPLARKAK RAEAYQGLSS ELAQLNLLLA VDDLRRLQRA
WDGALKEETE AAALIDVKRF ELEQSNEKLE KLQVMLQEKG LYVGDLTERR GRFHMVVERI
DSADMILSEK ARSIASRLEN ARNTSSGSAR RIGLLSDEVD ELSARLDAEV AKRDTLETET
KELESRVAVL RANLSAFDTQ AGEVQTRLRT CERDIEKKNA ALVKMQESAA SATARRTMLT
ERRAEVLQDL ERAKAELDTH CQGIDAQAAE IEKLTEDSRK AALEADAADR AVKVARQERK
DARDALQSLQ GEIRALKQVV RSMQTKSEAS ELMSRQGFEL DGDAKSLASL MRVRDGLEPL
VERLLGDDVA SLFVHDADTA RNLVSDVNAA GLNGEASVLF PGAQGRHADG ARLLDRIDAD
ADVMGALESL IGDVVVVDTV DEAFAGSAEA GVRYLTRDGV LVWPGSKARV LGRVEEGEGM
LAYERRIAEL EGKVGGLEAA VASAEAALTA ADEDLERKQA MSLDLARTSA QKKGDHASAQ
AERGRLAARV GTLEANLQSL GTELAAVESK LSDSDPQIAD AQAALAILRA ERDELQSKSA
ESQSQRAALS DDVQQASSKA SESKLAFATS KERVSSLIRE HGERRRDLDR ARRACERADG
DIRLLSAAEA RIAPLHAIFA SLRESAQAYV DDLAGKAALE QSSSAGLNDA IGAARTASRD
AQKQLDDATQ RLNDIRVSKG KLEVQVEAAI TTIVDECGVP LDVALETAEP EDRATAESRA
FELRRKIERM GTIDSSAAEE YEAMNERYEY LSSQIEDMEA ARRSLMRIID AIDDRMQEQF
NATFEAVNAN FSDIFARLFP GGSGSLELVD TGEGSPQGVE VNAQPRGKRL TKMMLMSGGE
KSLTALALLF AVYKIRSTPF YILDEAEAAL DDSNLRRLTA YLEALRHETQ LILITHQRRT
MEMSDVLYGV SMQSDGVTKV VSQKLDRALA ESKR
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