Gene Shel_09800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09800 
Symbol 
ID8394871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1120714 
End bp1121514 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID644985739 
Productmetal-dependent hydrolase, beta-lactamase superfamily III 
Protein accessionYP_003143366 
Protein GI257063694 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.559051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG TCATGCTCGG AACCGGACAC GCGACCGTCA CCAAATGTTA CAACACCTGC 
TACGCCTACG AGGAGGACGG AAGGTCCTTC CTGGTGGACG CGGGCGGCGG AAACGGCATC
CTTTCGCAGT TGGAGAAAGC CGGGCTCGAG CTGGCCGATA TGGAGGGCAT GTTCATCACC
CACGCCCATA CCGACCACGT TCTGGGCGCC GTCTGGATCA TACGCATGGT GGCGGCGTCG
ATGCACCGCG GGCAGCGCAG CAGGCCGTTC ACCGTCTACG CGAACGAGAA GGTCATGCGC
GTGCTGGGCA CCATCGCCGA CATGTGCCTG CCGGCGCCGT ACCTCAAGCA GTTCGGCGAG
CCGCTGCGGT TCGTCACGTT GCAGCACGGC GACGAGTTCG ACGTGCTAAG CATGCGCTGG
ACGGCCTTCG ACATCGAATC GGAGAAGGAA CCGCAGATGG GCTATCGGGC GGTGCTTGCC
AACGGAACCG TCATCGGATG CACGGGCGAC GAGCCGGCCC ACGCCGTGAA CGACCCCTAC
CTGACAGGCG TCGACTGGCT GCTTACCGAG GCCTTCTGCC TGTCGGAAGA CGAGGAGACC
TTCCACCCGC ATGCGAAGAA CCACTCGACC GTGAAGGAGG CCGCCGCATC GGCGCAGCGG
CTGGGTTGCA AACGCGTGCT GCTCTACCAC ACCGAAGACG CCACCCTGCC CACCCGCAGG
CAGGCTTACA CCGCTGAAGC CCGAACCGCG TACGACGGCG AGATATTCGT TCCCGACGAC
CTGGAAACCA TCGAGGTGTA A
 
Protein sequence
MRIVMLGTGH ATVTKCYNTC YAYEEDGRSF LVDAGGGNGI LSQLEKAGLE LADMEGMFIT 
HAHTDHVLGA VWIIRMVAAS MHRGQRSRPF TVYANEKVMR VLGTIADMCL PAPYLKQFGE
PLRFVTLQHG DEFDVLSMRW TAFDIESEKE PQMGYRAVLA NGTVIGCTGD EPAHAVNDPY
LTGVDWLLTE AFCLSEDEET FHPHAKNHST VKEAAASAQR LGCKRVLLYH TEDATLPTRR
QAYTAEARTA YDGEIFVPDD LETIEV