Gene Shel_09790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09790 
Symbol 
ID8394870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1120079 
End bp1120711 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID644985738 
Productribonuclease 
Protein accessionYP_003143365 
Protein GI257063693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.530418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT CCCGTACCAA ATCCCTCATC GTAGGCACCG CGCTGCTGCT GTTGCTGGCG 
CTTGCCTGGA TCGTGCTCCC CAGCGTGGCC GGCGGCTCGG ATGCCGACAA CGCCTCCGAC
ACCGCAGCCG TCACGGAGCA GGCGACCGAA GCCGACGCCG CCGACGAATC GTCAGAAACG
GAGCCCACGC CCGCAGGCGG GCAGGCCGAG CAGGAAGGCG CCGATGTCGA AGCCGAAAGC
GCATCGGACG GCGGCAGCGA GCCTGCGGCA TCGGGCGCGC CGAGCATTGC CGTCACCGAG
AACGGCGAGT ACATCACCAA GGACGAGGTG GCCGCCTACA TCCACGAGTT CGGACATCTG
CCAGGCAACT TCATCTCGAA GACGAAAGCC AAAGACGCCG GATGGAAATC CGTCTCGTAC
GACCTTGACG AAGTGTGCCC CGGCAAAAGC ATAGGCGGAA GCCGCTTCTA CAACGATGAG
GGGCTGCTAC CCGATGCCGA CGGCCGCACC TGGACCGAAT GCGACATCAA TTACACCGGC
GGCAACCGCG GCGCCGAGCG CATCGTATTC TCCAACGACG GACTCATCTT CTACACGAGC
GACCATTACG AAACCTTCGA ACAGCTGTAT TAG
 
Protein sequence
MQESRTKSLI VGTALLLLLA LAWIVLPSVA GGSDADNASD TAAVTEQATE ADAADESSET 
EPTPAGGQAE QEGADVEAES ASDGGSEPAA SGAPSIAVTE NGEYITKDEV AAYIHEFGHL
PGNFISKTKA KDAGWKSVSY DLDEVCPGKS IGGSRFYNDE GLLPDADGRT WTECDINYTG
GNRGAERIVF SNDGLIFYTS DHYETFEQLY