| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09360 |
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| Symbol | |
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| ID | 8394827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1079984 |
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| End bp | 1082809 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644985695 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003143326 |
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| Protein GI | 257063654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0912391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.894138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATA TGAGAGTTCT GGAATTAGCC AAAGAATTCG GTATGGACAG CAAGGAGCTT
CTTGCGAAGA TCCATGATCT GAAGATCCCC GCCAAGAGCC ATGCTTCGCC GCTTACCGAA
GAGAACGTCG AAAAGATCCG CAAGGCGCTG GCACCCGAAG TCGGTGCCGC CGCAGCGGGC
CTCGACAGCA AAGAAGCCGC TGCCCTGAAG GCCGAGCAGG AGGCGGAAGC CGCCAGGAAG
GCCGAAGAGG AGGCGGAGCG CCGCAAGGCC ATGGAGCACG AGCGCGCCAT GCGTGACGCC
GAGCGTGCCG CCCGTGGCGT TTCGACGCCT GCGCCGGCCC CCGAAGAGCC TGCGCACACG
GTGAAGCCGG CCCCGAAGGT CTCTTCGGGC CTGTCCAGCC TTGCCCAGCA GATAGAGGAG
CAGCGCCAGG CCGAAGCGGA GCGCAAGGCC AAGCGCGAGG CCGAGGCCCG CGCTGCCAAG
CTGTCAGCCG AGGTGGCCAA GAAGAAGGCC GTGGCAGAGG CTCTTGCCAA CCGTAACGGC
AAGAAGTCTT CCGCCAAGAC CGAGGAGACG GTCCAGCGGG CCCCCAAGAA GCCCGCGCCG
GCTCCCACGC CGACCCGTCG CACCTCCGCG TTCAACTCGC TGCTTTCGCA GATAGAGTCC
GAGAACGCGC GCATTAACGC CGAGGCGGAG GAGCGCAAGG CCGCCAAGAA GAACAGCAAC
CGCAATGCCG GCGGCAACCG TCCTGCGGCT GCCCACAACG ACGGCAAGGC CGGCGTTCAG
GACAACCGTG GCGGCAAGAA GCGCGGCAAG CGCAACGAGC ATCGCTTCGA GCCCGATGTG
CCTGAGCTGA ACGCCCAGGA AGCGGCGTCC GGCGAGGACA GGTATGCCCA GATGGCCGTT
CAGGCCGAAA AGCTGCAGCG CGACAAGGTG CTGGCCGAGG CCCGCGCCGC CGTGGCCGCA
GCCAGCAGCA ACGAGGGCGA AGGCCGTCGC CGCAAGCGCA AGGAGAAGCG CGAGGCCGAG
CAGCGCGAGC GTCTGGCGAT GGAAGCCATC GAGCACGGCA TCGACCCCGA CCTGGTGCTC
GACGACAGTG TTGTCGAGGT GGGCGAGGGC GTAACCGTCG GCGAATTCGC CGAAGCCCTG
GGCGTTCCCT CCAGCGACGT CATCAAGCGA CTGTTCATGC TTGGGCAGGC GTTCACCGTC
ACCCAGACCA TGCCTGAGGA GATGGTCGAA CTGATCGCCG ACGACATGGG CCGCAAGGTC
CGCATCGTGT CGCCGGAGGA GGAGTACGCC ATCGTCTACA ACGACTCCGA AGAAGACCTG
AAGCCCCGCC CGCCGGTGGT CACGGTCATG GGCCACGTCG ACCACGGCAA AACCTCGCTG
CTCGACGCCA TCCGTTCTTC GGGCGTCGCC CTGTCCGAGG CCGGCGGCAT CACCCAGCAC
ATCGGCGCAT CGGTGGTCAA CGTGCAGGGC CGTCAGGTCA CGTTTATCGA CACCCCCGGC
CACGAGGCGT TTACCGCCAT GCGTGCCCGC GGTGCTGAAG TGACCGACGT TGTCGTTCTG
GTCGTTGCGG CCGACGACGG CGTCATGCCC CAGACCGTTG AGGCAATCAA CCACGCAGAG
GCCGCAGGCG TGCCCATCGT GGTTGCCGTC AACAAGATCG ACAAGCCCGG CGCGAATCCC
GACCGTGTGC GCCAGGAACT TGTGGAATAC GGCGTCATCC CCGAAGAATG GGGCGGCTCC
AACATGTTCG TCAACGTGTC CGCCAAGAAG AAGGAGGGCA TCGACGATCT GCTCGAGACC
ATCCTGCTGC AGGCTGACGT GCTCGAACTG AAGGCCAACC CCGACGCCAT CGCATCCGGC
TTCGTCATCG AGGCGAACCT GGACAGGGGC CGCGGCCCTG TTGCCACCGT TCTGGTGCAG
CGCGGCACCT TGAAGCCTGG CGATGTGGTC GTCGCAGGTC AGAGCTATGG TCGCGTTCGC
GCCCTGGTCG ACCCGCGCGG CAACCACACC AAGGCCGCCA AGCCTTCCGA CCCGGTTGAG
ATCTTGGGTC TGGGCAGCGT GCCTACCGCA GGTGACGAGT TCCGCGTATT CGAAGAGGAG
CGCGACGCCC GCAAACTGGC CGAAGAGCGC CAGATGCGTG CCCGCCTCAA GGAGCAGGAA
GCCCGCGGGC ATGTCTCCCT GGACGACTTG TTCAGCCGTA TCGAAGAGGG CATGGCCGAC
CTCAACCTGG TGGTCAAGGC CGACGTTCAG GGTTCCATCG AGGCTCTGCG CGACGCCTTC
GCCAAGATGG ACCAGTCCGA GGTCCGCATC AACATCATCC ATGCCGCTGT CGGCGGCGTG
ACCGAGACCG ACGTCACGCT TGCTGCCGCG TCGGACGCCA TCATCATTGG CTTCAACGTG
CGTCCCACGG CCGGCGCCCG CAAGTCCGCC GAGCGCGAGA AGGTCGACAT CCGCCTGTAC
CGCGTCATCT ACCAGGCCAT CGAGGACATC AATGCCGCGC GCGTCGGCAT GCTTGCCCCC
GAAATCATCG AGCGCGACAC CGGTTCGGCC GAGGTCCGCG ACGTGTTCCG CGTACCCAAG
GTGGGCAACG TCGCCGGCTG CTACGTCACC GAAGGCGAGC TGTCCCGCGA CGACCGTGTC
CGCGTGGTCC GCAACCAGAC CATCATCTTC GAAGGCACGT TGTCTTCGCT GCGCCGTTTC
AAGGACGACG TCAAGACGGT CAAGCAGGGC TACGAATGCG GCATCAGCGT CGACGGCTAC
AACGACGTCA AGGTGGGCGA CATGATCGAA GGTTACCGCA TCGAGCAGGT CGCACGTACC
GAATAA
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| Protein sequence | MPNMRVLELA KEFGMDSKEL LAKIHDLKIP AKSHASPLTE ENVEKIRKAL APEVGAAAAG
LDSKEAAALK AEQEAEAARK AEEEAERRKA MEHERAMRDA ERAARGVSTP APAPEEPAHT
VKPAPKVSSG LSSLAQQIEE QRQAEAERKA KREAEARAAK LSAEVAKKKA VAEALANRNG
KKSSAKTEET VQRAPKKPAP APTPTRRTSA FNSLLSQIES ENARINAEAE ERKAAKKNSN
RNAGGNRPAA AHNDGKAGVQ DNRGGKKRGK RNEHRFEPDV PELNAQEAAS GEDRYAQMAV
QAEKLQRDKV LAEARAAVAA ASSNEGEGRR RKRKEKREAE QRERLAMEAI EHGIDPDLVL
DDSVVEVGEG VTVGEFAEAL GVPSSDVIKR LFMLGQAFTV TQTMPEEMVE LIADDMGRKV
RIVSPEEEYA IVYNDSEEDL KPRPPVVTVM GHVDHGKTSL LDAIRSSGVA LSEAGGITQH
IGASVVNVQG RQVTFIDTPG HEAFTAMRAR GAEVTDVVVL VVAADDGVMP QTVEAINHAE
AAGVPIVVAV NKIDKPGANP DRVRQELVEY GVIPEEWGGS NMFVNVSAKK KEGIDDLLET
ILLQADVLEL KANPDAIASG FVIEANLDRG RGPVATVLVQ RGTLKPGDVV VAGQSYGRVR
ALVDPRGNHT KAAKPSDPVE ILGLGSVPTA GDEFRVFEEE RDARKLAEER QMRARLKEQE
ARGHVSLDDL FSRIEEGMAD LNLVVKADVQ GSIEALRDAF AKMDQSEVRI NIIHAAVGGV
TETDVTLAAA SDAIIIGFNV RPTAGARKSA EREKVDIRLY RVIYQAIEDI NAARVGMLAP
EIIERDTGSA EVRDVFRVPK VGNVAGCYVT EGELSRDDRV RVVRNQTIIF EGTLSSLRRF
KDDVKTVKQG YECGISVDGY NDVKVGDMIE GYRIEQVART E
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