| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09350 |
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| Symbol | |
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| ID | 8394826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1078745 |
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| End bp | 1079950 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985694 |
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| Product | transcription termination factor NusA |
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| Protein accession | YP_003143325 |
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| Protein GI | 257063653 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000834112 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.892609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTG AATTGATGGA TGCCCTTCAG GCGCTGGCCC ATGAGAAGAA GATCGACGAG
ATCTACCTCA TCGAACGCCT CGAGGCCTCC CTGGCCAAGA GCTACCAGTC CATTCTCAAT
CTGGAATGGG ATGCTCGCGT GACCATCGAC CGCACCACCG GTCAGATCTA CGTGTACGAG
CTCGTCCCCA CGGGCGAGAT GGACGAAGAT GGCTACTGGA CCGAGTTCGA AGAGCGCGAC
GTAACGCCTT CCAACGTAAG CCGCATCGCA GCCCAGAACG CCAAGAGCGT CATCGCCTCC
ATCGTCCGTG AAGCCGGCCG CCAGAGCATC TACGACGAGT TCCGTGACCG CGTTGGCGAC
ATCGTCACGG GCACCGTGCT GCAGGGCACG CCTGACTTCA CCATCGTGAA GATCCGCGAC
GGCGTCGAGG CCGAGCTGCC GCATTACGAC GAGAAGCGCA ACCCCGGCGA ACGCAACGAG
GTTCCCGCAG GCGAGCGCTA CCGCCACAAC CAGCGCATCA AGACCCTGAT CATCGACGTC
CGCGACCCCA ATTCCGTGGA GAACCGCGGT CGTGGCGACC AGGCCCGTCC CGCCATCGTC
GTGTCCCGTA CCCATCCTGA CCTGATTCGC CGTCTTTTCG AGCTCGAGGT TCCCGAGATC
TACGACGGCA TGGTCGAGAT CAAGTCCATC GCCCGTGAGC CCGGCGCTCG TTCCAAGGTG
GCCGTGGCTT CCCGCGAGCC CAATCTGGAC CCGGTGGGTG CCTGCGTCGG CCCCAAGGGC
AGCCGCGTGC GCATGGTCGT CGAGGAGCTG CGCAACGAGC GCGTCGACGT CATCCAGTGG
TCGGAAGACC CCGCCAAGTA CGTCGCCAAC GCCTTGAGCC CGGCCCGCGT CACCCGCGTG
TCCGTTGATG AGGAAAACCA GTACGCGACT GTCATCGTGC CTGACGACCA GCTGTCTTTG
GCCATCGGCA AAGAGGGTCA GAACGCCCGT CTGGCGGCTC GCCTGACCGG CTGGCACATC
GACATCAAGT CCACCAGCTT CGCTGGACAG CCGGCCCCCG AGGTCAACAT GCTCATCGAC
GAGGAGCCCG AGGATGAGGA CGTCGAGTTC TGCTCGTACG TTTCCGAAAC CGGCGTCGCC
TGCCGCAACC ACGCCCGCCC CGGCAGCCGT TTCTGCGGCA TTCACGCCGA GTACGAAGAG
AAATAG
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| Protein sequence | MSSELMDALQ ALAHEKKIDE IYLIERLEAS LAKSYQSILN LEWDARVTID RTTGQIYVYE
LVPTGEMDED GYWTEFEERD VTPSNVSRIA AQNAKSVIAS IVREAGRQSI YDEFRDRVGD
IVTGTVLQGT PDFTIVKIRD GVEAELPHYD EKRNPGERNE VPAGERYRHN QRIKTLIIDV
RDPNSVENRG RGDQARPAIV VSRTHPDLIR RLFELEVPEI YDGMVEIKSI AREPGARSKV
AVASREPNLD PVGACVGPKG SRVRMVVEEL RNERVDVIQW SEDPAKYVAN ALSPARVTRV
SVDEENQYAT VIVPDDQLSL AIGKEGQNAR LAARLTGWHI DIKSTSFAGQ PAPEVNMLID
EEPEDEDVEF CSYVSETGVA CRNHARPGSR FCGIHAEYEE K
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