Gene Shel_09210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09210 
Symbol 
ID8394812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1062050 
End bp1062703 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID644985680 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003143311 
Protein GI257063639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.355198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.265854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCCA TCGACACAAT GATGCTTCTT GGGGACACTT TTGTAGAATT GTCCGAAAAT 
CTGCCCTTTG ACAAAATCTC TGTTTCGGAC ATCGTTGCCG CATCCCAAAA GAACCGCAAA
ACGTTCTACT ATCATTTTGA GAGCAAGACG CACCTCATTC GCTGGATCTT CCGCAGCGAT
CTGGCGCGCA TGCTGCGCGA CCGATTCGAA GAATCCCAGT TGGTTTTCGA GCCCATGACC
GAAGAGTCCA TGCCGGACCT CCCCTACTAC GTGCGGCTCA AGACGGGCGT GCGTTCACTC
GACTCGTCGG AGTTTCTGCG TGCGTTCGCC GATGTCCTTC AGGAGCGCAA GACCTACTAT
AGGAGAGCCT TGAGGTCCAA CGAACCCGAC AGCCTGCGGA CGTACCTCAT CAACCTGTAC
ACGCCCGCAC TGGAAGACGA CATCCGCTTC ATCCTGAGCA ACCGCTGGCT TTCCGAATCC
AGCATCCGGT TTCTGGCGGA GTTCTACTCG GGCGCCATCA TCACATACAT CATCACGAAG
CTTTCCACAT CCGATGACGA GGACATCCTC GAGGACATGA AGCATTTCAC CAACATCGTT
CATTCGTCTT TGGAAGAACA GATCAACCAG CAGCAGCTTC GCCGCATGGC GTAG
 
Protein sequence
MGSIDTMMLL GDTFVELSEN LPFDKISVSD IVAASQKNRK TFYYHFESKT HLIRWIFRSD 
LARMLRDRFE ESQLVFEPMT EESMPDLPYY VRLKTGVRSL DSSEFLRAFA DVLQERKTYY
RRALRSNEPD SLRTYLINLY TPALEDDIRF ILSNRWLSES SIRFLAEFYS GAIITYIITK
LSTSDDEDIL EDMKHFTNIV HSSLEEQINQ QQLRRMA