Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09210 |
Symbol | |
ID | 8394812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1062050 |
End bp | 1062703 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644985680 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003143311 |
Protein GI | 257063639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.355198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.265854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATCCA TCGACACAAT GATGCTTCTT GGGGACACTT TTGTAGAATT GTCCGAAAAT CTGCCCTTTG ACAAAATCTC TGTTTCGGAC ATCGTTGCCG CATCCCAAAA GAACCGCAAA ACGTTCTACT ATCATTTTGA GAGCAAGACG CACCTCATTC GCTGGATCTT CCGCAGCGAT CTGGCGCGCA TGCTGCGCGA CCGATTCGAA GAATCCCAGT TGGTTTTCGA GCCCATGACC GAAGAGTCCA TGCCGGACCT CCCCTACTAC GTGCGGCTCA AGACGGGCGT GCGTTCACTC GACTCGTCGG AGTTTCTGCG TGCGTTCGCC GATGTCCTTC AGGAGCGCAA GACCTACTAT AGGAGAGCCT TGAGGTCCAA CGAACCCGAC AGCCTGCGGA CGTACCTCAT CAACCTGTAC ACGCCCGCAC TGGAAGACGA CATCCGCTTC ATCCTGAGCA ACCGCTGGCT TTCCGAATCC AGCATCCGGT TTCTGGCGGA GTTCTACTCG GGCGCCATCA TCACATACAT CATCACGAAG CTTTCCACAT CCGATGACGA GGACATCCTC GAGGACATGA AGCATTTCAC CAACATCGTT CATTCGTCTT TGGAAGAACA GATCAACCAG CAGCAGCTTC GCCGCATGGC GTAG
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Protein sequence | MGSIDTMMLL GDTFVELSEN LPFDKISVSD IVAASQKNRK TFYYHFESKT HLIRWIFRSD LARMLRDRFE ESQLVFEPMT EESMPDLPYY VRLKTGVRSL DSSEFLRAFA DVLQERKTYY RRALRSNEPD SLRTYLINLY TPALEDDIRF ILSNRWLSES SIRFLAEFYS GAIITYIITK LSTSDDEDIL EDMKHFTNIV HSSLEEQINQ QQLRRMA
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