Gene Shel_09200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09200 
Symbol 
ID8394811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1061534 
End bp1061941 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content59% 
IMG OID644985679 
Productnucleoside diphosphate kinase 
Protein accessionYP_003143310 
Protein GI257063638 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.397832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.262765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG AAAAGACCTA CTCCATGCTC AAGCCCGATG CGGTGCGCAA CCACCACATC 
GGAGAGATTA TCGCGCGCAT CGAGCGTGCC GGGCTGACCA TCGAACGCAT GGTTCTGGAA
CCGGTCACTC CTGAACAGGC GGCTGCGAAC TATGCCGAGC ATGAAGGCAA GCCCTTTTAT
GATGGGTTGA TCGCTTACAT CACCAGCGGT CCCGTGGTCA AGATGGTTGT TTCCGGCGAA
GGCGCCGTCA AGAAGATGCG CACGCTGATG GGACCCACCA ACCCGGCCGA AGCCGCCCCC
GGAACCATCC GCGGCGATTT CGGCCTGATC ATGGATGAGA ACGTCATCCA TGGTTCCGAC
TCCGTGGCTT CCGCCGAGCG TGAGATCAAC ATCTTCTTCG GCGAATAA
 
Protein sequence
MAIEKTYSML KPDAVRNHHI GEIIARIERA GLTIERMVLE PVTPEQAAAN YAEHEGKPFY 
DGLIAYITSG PVVKMVVSGE GAVKKMRTLM GPTNPAEAAP GTIRGDFGLI MDENVIHGSD
SVASAEREIN IFFGE