Gene Shel_09020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09020 
Symbol 
ID8394793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1044777 
End bp1045886 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID644985661 
Productpeptide chain release factor 2 
Protein accessionYP_003143295 
Protein GI257063623 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0325774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AACAGATACA ACTGGCGTCC CTCGACGAGC TGGCAGAACG AGTAGCTGCT 
GCTCGAGAGT ACCGGCATAT TAACGAGAAC GAATCGCTGC TCGAGAAGCT CAACGAAGAG
ATAGCTTCGC CAGATTTCTG GAACGATTCC CAGAACGCCT TGCAGGTGTC CAAGCGTGCC
AGCGAGGTGC GCTCGATTCT GGATGAGTAT GAGCACGTCG CCAGCTTGCT GGAAGATGCC
CGCACAGCCG ACGAGCTTTC CGCAGACGAC GAGATGTTCG CCGAGGAGCG CGACGAGCTG
CGCAGGCAGC TGTCCGACTT GCTGGACGGG CTGGAGGTGT CTTCCTGGTT CTCGGGCGAA
ATGGATCCTT GCGACGCCAT CGTTTCCATC AATCCCGGGC AGGGCGGCCT GGAGGCGCAG
GACTGGGTCG ACATGCTGTA CAAGATGTAC AGCAAATACG CCGAGAAGAA AGGCTGGAAG
GTCAGGCTTC TCGACATCAC CCCAGGTGAG GTCATCGGTT TGGATCGCGC CGTCATCCAG
ATCGAGGGCA AGAACGCCTA CGGCATGCTT CGCAGCGAGA ACGGCGTGCA CCGCCTGGTG
CGCATCTCGC CGACGGATGA CAAGAAGCGC CGTCAGACCA CCTTCGCCGG CGTTGAGGTT
CTGCCCGTGG TCGACGACGA GATCGAGGTC GATCTGAACG TGAACGACGT GCGCGTCGAC
GTGTACCGCT CGAGCGGACC CGGCGGCCAG TGCGTCAACA CCACCGACTC GGCGGTCCGT
CTGACCCACA TTCCCACAGG CATCGTGGTG ACGTGCCAGA ACCAGAAGAG CCAACTTCAG
AACAAAGACG CCGCATTCAA GGTCCTGCGT GCTAAGCTGT ACGAGCTTGA ACGCCAGAAG
CGCGAAGAGG AGATCGACGC GCTGCGTGGC GAACGTATGG ACAACAGCTT CGGCAGCCAG
ATCAGAAACT ATGTCCTTTA TCCGTATCAG CTCGTAAAGG ACTTGCGGAG CGGGATTGAA
ACTGGGAATG TTGACGCCGT CCTCAGCGGG GACATAGAGG AATTCGTTAT CGGCTATCAT
CGCTGGCGTG TCGCACAGCG ATTGGCATAA
 
Protein sequence
MAEEQIQLAS LDELAERVAA AREYRHINEN ESLLEKLNEE IASPDFWNDS QNALQVSKRA 
SEVRSILDEY EHVASLLEDA RTADELSADD EMFAEERDEL RRQLSDLLDG LEVSSWFSGE
MDPCDAIVSI NPGQGGLEAQ DWVDMLYKMY SKYAEKKGWK VRLLDITPGE VIGLDRAVIQ
IEGKNAYGML RSENGVHRLV RISPTDDKKR RQTTFAGVEV LPVVDDEIEV DLNVNDVRVD
VYRSSGPGGQ CVNTTDSAVR LTHIPTGIVV TCQNQKSQLQ NKDAAFKVLR AKLYELERQK
REEEIDALRG ERMDNSFGSQ IRNYVLYPYQ LVKDLRSGIE TGNVDAVLSG DIEEFVIGYH
RWRVAQRLA