Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08690 |
Symbol | |
ID | 8394760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1008866 |
End bp | 1009402 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644985629 |
Product | transcription antitermination protein nusG |
Protein accession | YP_003143265 |
Protein GI | 257063593 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000619667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000019364 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAAGA AGTGGTACGT CCTGCATACC TATTCCGGGT ACGAAAACAA GGTGAAGCAG ACCCTCGAAA GCCGTGTCGA GATGATGGGC CTCGAGGATA GCATCGTCGA TATACAGATC CCGACCGAGA TGGTTACCGA AATCAAAGAA GGCGGCCGTC GCGTCGAGAG CGAAAAGAAG GTATTCCCGG GCTACGTGCT GGTCCGCATG GAGATGAACA ACCAGAACTG GTCGGTCGTT CGCAACACTC CCGGCGTCAC CGGTTTCGTT GGCGGACAAG GCGAACCTGA ACCGCTGACC CGCGAGGAAT ACAACAAGAT CATGAAGCGC ACCTCCGTTA AGGCGGGCGC TCCGAAGAAG ACCTCCACTT CGCTTGAAGT GGGGCAGTCC GTGAAGGTCA CCAGCGGCCC CTTGGCCGAT TTCGACGGCA CCGTTTCCGA AGTGTCGCCC GAAGCCGGCA AGGTGAAGGT CCTGGTTTCG ATCTTCGGCC GCGAGACCCC CGTCGAGCTT TCGTTCGACC AGGTAGCTCG CATTTAA
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Protein sequence | MAKKWYVLHT YSGYENKVKQ TLESRVEMMG LEDSIVDIQI PTEMVTEIKE GGRRVESEKK VFPGYVLVRM EMNNQNWSVV RNTPGVTGFV GGQGEPEPLT REEYNKIMKR TSVKAGAPKK TSTSLEVGQS VKVTSGPLAD FDGTVSEVSP EAGKVKVLVS IFGRETPVEL SFDQVARI
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