| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08060 |
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| Symbol | |
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| ID | 8394697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 933352 |
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| End bp | 934974 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985566 |
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| Product | beta-glucosidase-like glycosyl hydrolase |
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| Protein accession | YP_003143211 |
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| Protein GI | 257063539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000859864 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTTTC TTCTGCAGTT GGTGTTCAAT GTCTTAGTTA TGGAAACGAA CAAGCCGTCA
TATCCCGCAA TCCCGCGTCG GACATTCGCC ATCGGAATGG GCTGGGCTGC CTCGTTGTTT
GCACTGGGCG CCTGGGGTTG CACCGACGGC AAATCCGACG GCACCCCGTC CAGCAACGCC
GAAGCCGATT CCGAGGGATC TCCCGAAGAG GAACTTGACA AGCAGGTCAA GCAGGCAATG
CGGCGCATGT CTATGGAGCA GAAGGTAGCG CAGCTTTTCT TCGTGCCGCC CGAATCCATC
ACCTTCGTGA AAACCGTCGT GGCAGCCAGC GAGGCTACGC TAGAGGCGCT GCAGCACTAC
CCCGTCGGCG GATTCCTGTA CTCCGCAGCC AACTTCACAA GCTCCGACCA GGCCGCCACC
ATGACCACCA ACGCGTTCCT CCACGGATAC AACGTGAACG GGTTGCCGCT CATGCTTGCT
GTTAACGAGG AAGGCGGGTA TCTCAACACC GTCGCCGACA ACGACGCGCT CGGCGCGATC
GCGCAGCCAT CGGCCCGCGA GGTCGGAAAC GACGGCGACA CGCAAAAGGC GGGCGACCGC
GCGCACAGCA TTGCAAACTA TCTTTCTGCC ATCGGCCTGA ACACGAATAT CGGCCTGGTA
TGCGACATGT GTTCCGAGTA CGCCCCTGTG GAAAGCAGCC CTGCCGAAGA TGCCGAGGAA
GCGGCTTCCG AAGAGAACGC CGAGGCGGTC GAGGCCACCG AGGTCGAAAG CGAAACTGCG
CCTGAGACCG GTGCTGGCAC CGAAGCCGAA GCCGAAGTTG AACCCGAAGC TGGAACCGAG
ACCAGCGCTG AAGCCGAGGC TGAATCCGAT GTTGGAGCCG AACGGACCGA CGCCTCGGAA
CCCGAAGCCG ATTCTTCCCC CGAGAAAAAA CCTGATGCCG AAACCGGCCA GGACAACAAG
ACCTCCGGCA GGAAGAACGT GACCTCCGAA GAAGCCGAAA GCGACGAGGA CCAAACCATA
TACGACAAGC TCGACATCTC GCCCGGCGAG CTGATGAGCT CGCGTTCTTT CTCCAACGAC
CCCGCCGTAG TCTCCGCGAT GGTCTCGGCG GAAATCGAGA GCTACACGAA ATCATCGGTC
ATGACGATTG TCAAGCATTT CCCGGGCATC GCCTGCCCTC AAGACGGGTC CGTCATGTAC
TCGCTGGCCA CCGACGCCGC GCTGCGCGAC AAGAACATGT TGCCGTTTAC GGCAGCCATC
GACGCCGGCG TGCCGGCTAT CATGGTAAGC AACGCGTCCA TCCCCTGTGT GGCAGGAGAA
ACGCCCGCAT GCCTGTCCGC ATCGGTCGTA ACCGACCTGC TCCGTGACGA GTTGGGATTC
GAAGGTATCA TCATGACCGA CCGCCTGGAT AACGATATCA TGGCAACGCA CAAGGGAGCA
GCTGTCGACG CCCTGCGTGC CGGTTGCGAC ATGATCTTCT GCCCGGCGGA TTTCGAATCC
TCGTACAACC AGGTGCTCGA CGCCGTGGCC CACGGACCCC TGGACGAAGA GCGCATCAAC
GAATCCGTGC GCCGCATCAT CCGCATCAAG CTGCAGTCGC TGCCCCTGAG CATCAAACAG
TAG
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| Protein sequence | MAFLLQLVFN VLVMETNKPS YPAIPRRTFA IGMGWAASLF ALGAWGCTDG KSDGTPSSNA
EADSEGSPEE ELDKQVKQAM RRMSMEQKVA QLFFVPPESI TFVKTVVAAS EATLEALQHY
PVGGFLYSAA NFTSSDQAAT MTTNAFLHGY NVNGLPLMLA VNEEGGYLNT VADNDALGAI
AQPSAREVGN DGDTQKAGDR AHSIANYLSA IGLNTNIGLV CDMCSEYAPV ESSPAEDAEE
AASEENAEAV EATEVESETA PETGAGTEAE AEVEPEAGTE TSAEAEAESD VGAERTDASE
PEADSSPEKK PDAETGQDNK TSGRKNVTSE EAESDEDQTI YDKLDISPGE LMSSRSFSND
PAVVSAMVSA EIESYTKSSV MTIVKHFPGI ACPQDGSVMY SLATDAALRD KNMLPFTAAI
DAGVPAIMVS NASIPCVAGE TPACLSASVV TDLLRDELGF EGIIMTDRLD NDIMATHKGA
AVDALRAGCD MIFCPADFES SYNQVLDAVA HGPLDEERIN ESVRRIIRIK LQSLPLSIKQ
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