| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07540 |
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| Symbol | |
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| ID | 8394645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 875888 |
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| End bp | 877687 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985514 |
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| Product | carbon starvation protein, predicted membrane protein |
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| Protein accession | YP_003143160 |
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| Protein GI | 257063488 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.620318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.553558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA TACTCGTCCT GCTTGTCAGC ATCGCCGTTT TGATCTGCGG ATACGTCTTT
TACGGCAGCT GGCTGGCAAA ACAATGGGGC ATCGAGCCCG ATAGGGTGAC CCCCGCCCAT
GAGCTGGAGG ACGGCGTGGA CTTCGTTCCC GCCAAACCCT ATGTCGTGCT GGGCCACCAC
TTCTCGTCCA TCGCCGGAGC GGGTCCCATC AACGGTCCCA TCCAGGCCGC GGTGTTCGGC
TGGGTTCCCG TGCTCCTGTG GGTCCTGATC GGAGGCATCT TTTTCGGAGC GCAGCATGAC
TTCGGCTCGC TTTTGGCATC CATCCGCAAC AAAGGCGCGA CGCTGGCCAC CGTCGTCCGT
GACAACATCG GAGAAGACGC CAAGAAACTC TTCTGCGTGT TCGCGTACCT TACCCTTGTT
CTGGTGGTGG CCGCCTTCGC ATCCATCGTA GCCAACACCT TCCAGGTCAT GCCTACGCAG
ACCGACGTCA TCAACATTCA GAACTCCCAG GTCGCCATGA TCTCCACTCT GTTTATCGTG
GCAGCCGTCA TCTGGGGTTT TGCAACTCGC GGCCGCAGCA TCCCCACCGC GGCGAACGTT
GCGGCAGCCA TCGTGGTCAT CGTCGCCATC GTGGCTGTGG GATACAACCT GCCCAATGTC
ATCACGCTCG GCCACGATGC CTGGATGTAC ATTCTGGGCG TCTACATCCT GATCGCCTCC
GTCACCCCCG TGTGGATCCT CCTGCAGCCG CGCGACTATC TGTCGAGCTA CCTGTTGTAC
GGCATGCTGG TACTTGCCAT CGTCGCAGTT GTCGGCGCGG GCGTCATGGG AGTTGCCGGC
GACCTGCAGA TTCCCGCCTT CGCAGGTTTC TCGGTCACCA ACACCGCATA CGATGTAACT
ACGGGGGCTG CCATCGTCGA TCCCGAAACC GGCCTTGCCG TGATCAACAA GGCGGCCCAG
GGAGGCTTCC TGTTCCCGGC TTTGTTCGTG ACCATCGCCT GCGGCGCCAT TTCCGGCTTC
CATAGTCTGG TCGCCTCCGG TACCACTTCC AAACAGATCG AGAAGGAATC CCAGGCACAG
CCCATCGCCT ACGGCGGCAT GCTCATCGAG TGCCTTTTGG CCGTGCTGTC TTTGTGCGCC
GTCGGCTTCG TGTGGGCCCA ATACAGCGCC GGCGGCTACG CCTCGCCTAC CCAGGTGTTC
GCAGACGGTC TTTCCCAGAT GCTCGCCGTC ATTCCTTTCA TCGGCGGCAC GCAGCAACTC
GCCTACGCCC TGCTGATTCT GGCAGTGTCG GCCTTCTGCC TGACATCCCT GGACACCGCA
ACCCGTCTTG CGCGCTACAT GTTCCAGGAG CTGTGGATTC CCGCAGGCAA GACCGCAGAA
GAACTCACCG GCTTTCGCAA GGTCCTGTCC AACAAGTATG TCGCCACGGT CATCACCGTC
GTCCTGGGCA TTGGGTTGGG CATGACCGGC TACACCATCA TCTGGCCGCT TTTCGGCGCG
GCGAATCAGC TGCTTGCCGC ATTGGCGCTG CTCACGGTTT GCACGTGGCT CGGCAACATG
GGCAGGAACA ACAAGATGTT CTATCTGCCG ATGGCTTTCA TGCTGCTCGT CACGCTGACG
TCTCTGGCCC TTACCATGCA GACCAAGGTG GTTGCCATCA TGGCCGGAGG CGACATCTTC
GCCCCTATCG TTCAGCTGGC GCTTGCCATC GCCCTGTTCG TCCTGGCCAT CATCCTGGCC
GTCAAGGGCG TCAAGACCAT CGCATCCCAG AAGTCGAAGT CCGAGGCCGA GGCCGCATAG
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| Protein sequence | MNAILVLLVS IAVLICGYVF YGSWLAKQWG IEPDRVTPAH ELEDGVDFVP AKPYVVLGHH
FSSIAGAGPI NGPIQAAVFG WVPVLLWVLI GGIFFGAQHD FGSLLASIRN KGATLATVVR
DNIGEDAKKL FCVFAYLTLV LVVAAFASIV ANTFQVMPTQ TDVINIQNSQ VAMISTLFIV
AAVIWGFATR GRSIPTAANV AAAIVVIVAI VAVGYNLPNV ITLGHDAWMY ILGVYILIAS
VTPVWILLQP RDYLSSYLLY GMLVLAIVAV VGAGVMGVAG DLQIPAFAGF SVTNTAYDVT
TGAAIVDPET GLAVINKAAQ GGFLFPALFV TIACGAISGF HSLVASGTTS KQIEKESQAQ
PIAYGGMLIE CLLAVLSLCA VGFVWAQYSA GGYASPTQVF ADGLSQMLAV IPFIGGTQQL
AYALLILAVS AFCLTSLDTA TRLARYMFQE LWIPAGKTAE ELTGFRKVLS NKYVATVITV
VLGIGLGMTG YTIIWPLFGA ANQLLAALAL LTVCTWLGNM GRNNKMFYLP MAFMLLVTLT
SLALTMQTKV VAIMAGGDIF APIVQLALAI ALFVLAIILA VKGVKTIASQ KSKSEAEAA
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