Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07530 |
Symbol | |
ID | 8394644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 874878 |
End bp | 875624 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644985513 |
Product | hypothetical protein |
Protein accession | YP_003143159 |
Protein GI | 257063487 |
COG category | [S] Function unknown |
COG ID | [COG2043] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.369542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTCA AGACAGACAA AATCTCATAC GGGTTTCCTC ATCAGGATTA TCCGAAGGAA CTGGTGAAGG AGACGCTTCA GGGTCTGACG GAGACGCTCG GCCTTGAGCG CGAGCCGGTC GCCATCACCT TCCTGTATGA CGAAGCGGAT TTCGAGGCGT ATCCTGCCCC GGTTCCGGAC TCGAAGATCC CGTATTGCGT CATGGTGAAA CAGGCCGCGA CGAAGGGCGT TGCCCGCAAG ACGCTGCTGG AACACCATGC ATGCGACGGC GGAACCACGG CGCTTGGCCT TGAGCCGAGC ACGCACGAGA TCGATTCCGG CAAAACCTAT TTCTCATATA ACCTGTATTC GTCCGTTTCG ACGGCGCATC GCCATCTTGA CGGCATCAAG CGCCTGTGCG ATGGACCGTT TTTCGTGCAT GGCGTTGCCA TCGTGCCCCT GTCCCAGTGC GAGCGTACGC CGGATGTCGT CATCATGGTG GTGAATGCAT GGCAGTCCAT GCGCCTGGTG CAGGGCTACG CATACCACAC GGGTAAGAAA CCCCAGATCG ACATGGGTGC CATGCAGGCC ATGTGCTCCG AGGTTACGGC GTCCCCGTAC TATTCCGGAG AACTGAACAT CTCCGTCATG TGTCCCAGCA CGCGCATGTT GTGCAAGTGG ACCGAAAACG ACATGCTCGC AGGCATTCCC TACGAACTGT TCGACATGAT TGCTTCGGGC GTCCAAGCTA CCGTCATGGA TTACTAG
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Protein sequence | MPFKTDKISY GFPHQDYPKE LVKETLQGLT ETLGLEREPV AITFLYDEAD FEAYPAPVPD SKIPYCVMVK QAATKGVARK TLLEHHACDG GTTALGLEPS THEIDSGKTY FSYNLYSSVS TAHRHLDGIK RLCDGPFFVH GVAIVPLSQC ERTPDVVIMV VNAWQSMRLV QGYAYHTGKK PQIDMGAMQA MCSEVTASPY YSGELNISVM CPSTRMLCKW TENDMLAGIP YELFDMIASG VQATVMDY
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