Gene Shel_07530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07530 
Symbol 
ID8394644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp874878 
End bp875624 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID644985513 
Producthypothetical protein 
Protein accessionYP_003143159 
Protein GI257063487 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.369542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCA AGACAGACAA AATCTCATAC GGGTTTCCTC ATCAGGATTA TCCGAAGGAA 
CTGGTGAAGG AGACGCTTCA GGGTCTGACG GAGACGCTCG GCCTTGAGCG CGAGCCGGTC
GCCATCACCT TCCTGTATGA CGAAGCGGAT TTCGAGGCGT ATCCTGCCCC GGTTCCGGAC
TCGAAGATCC CGTATTGCGT CATGGTGAAA CAGGCCGCGA CGAAGGGCGT TGCCCGCAAG
ACGCTGCTGG AACACCATGC ATGCGACGGC GGAACCACGG CGCTTGGCCT TGAGCCGAGC
ACGCACGAGA TCGATTCCGG CAAAACCTAT TTCTCATATA ACCTGTATTC GTCCGTTTCG
ACGGCGCATC GCCATCTTGA CGGCATCAAG CGCCTGTGCG ATGGACCGTT TTTCGTGCAT
GGCGTTGCCA TCGTGCCCCT GTCCCAGTGC GAGCGTACGC CGGATGTCGT CATCATGGTG
GTGAATGCAT GGCAGTCCAT GCGCCTGGTG CAGGGCTACG CATACCACAC GGGTAAGAAA
CCCCAGATCG ACATGGGTGC CATGCAGGCC ATGTGCTCCG AGGTTACGGC GTCCCCGTAC
TATTCCGGAG AACTGAACAT CTCCGTCATG TGTCCCAGCA CGCGCATGTT GTGCAAGTGG
ACCGAAAACG ACATGCTCGC AGGCATTCCC TACGAACTGT TCGACATGAT TGCTTCGGGC
GTCCAAGCTA CCGTCATGGA TTACTAG
 
Protein sequence
MPFKTDKISY GFPHQDYPKE LVKETLQGLT ETLGLEREPV AITFLYDEAD FEAYPAPVPD 
SKIPYCVMVK QAATKGVARK TLLEHHACDG GTTALGLEPS THEIDSGKTY FSYNLYSSVS
TAHRHLDGIK RLCDGPFFVH GVAIVPLSQC ERTPDVVIMV VNAWQSMRLV QGYAYHTGKK
PQIDMGAMQA MCSEVTASPY YSGELNISVM CPSTRMLCKW TENDMLAGIP YELFDMIASG
VQATVMDY