| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07260 |
|---|
| Symbol | |
|---|
| ID | 8394617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 845854 |
|---|
| End bp | 847272 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644985487 |
|---|
| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_003143133 |
|---|
| Protein GI | 257063461 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAA TCGGCGGCGG CGGAACCGGC ATGGCGGTCA CCATCCAGGC CACCGAGCTG
GGCCTGAACG TGGTGCTGCT GGAGAAGGCG GGCGCATTGG GCGGCGCGTT CTCCGCAACC
GAGGGCATGT TCGGCGTGGG TTCGCACTGG CAGGAAGAGG CCGGCGAGCA CGGCACGGTG
GGCGAGGCCG TCCGCCGTTG CGTGAATTAC CACCACTACG TTCCGTCGAC CGAGCTGTAT
TACAACTTCT TCAACCAGAC CGCCGAGACC ATCCAGTGGC TGGAGGACCA CGACTGCACG
TTCCGCGCCG TGGTCGACTA CGGCGGAAAC CTGGCCTGGC ACGTGTACTA CTACGACGAG
AACGCCTCCA GCCCGGGCGC GTACTTCACC GACAGCCTGA TCAAGGCCAC CGAGGCCACC
GGCGCCGACA TCCGCCTGCC CTGCGGTGCG CGCAAGATCC TGGTCGAGGA CGGTGCTGTG
AAAGGCGTCA TCGCAGCGAA CGCCGATGGC TCCTTCGTCG AAATCGACGC TCCCGTGGTA
ATGCTGGCTT CGGGCGGCTA TGCCAGCAAC ATGGACTTCC TGCATGCCGT GTCTCCGTAC
ACCGTGAACA AGAACCTGGT GTCGCTGGGC GCTCCCGGCC GTGACGGCGA CGGCATGAGG
ATGGGCGTCG ACGCGGGCGT GGCGCTGTCC GAGGGCTACG GCACCGTGAT GTGGTGCGGA
CCTGCAGCTA TTGGCGCGCA GTGGACAACC GACGCGTACT CCGCCTCCGT ACAGCCGACC
CTGTGGGTGA ACCAGAACGC TAAGCGCTTC ATTGCCGAGG ACCTGTGGAT CGGCAACTTC
GCTGCCGGCG GCATCGCCTG CCGCGACCAG GAGCTGACCT ACGTCATCTT CCGCGAGCAG
GACCTGGCGG CATGGGAGCA GAACGGCCCG TACGGCACCG TGTTCACGTT CGGCACCCCC
GGCGTGCCCA TGGACGAGGC GCGCGCTCAG CTTGAGGCTC TGCCCAGCGT GCATGTGGCC
GACACCATCG AGGACCTGGA GGCCGCAGTT GGCCTGGACC CCGCCGCTCT GAAGGCAACG
GTTGACGAAT ACAACGGCTT CTGCGCTTCC GGCGAGGACC CGATTTTCGG CAAGGCGGCC
GACTACCTGA CCCCGATCGA CGAGGGCCCG TTCTGGATTC TCGTAGTTGC CGACGGCTAC
TACACCACCG TGGGCGGCTT GGAGATCAAC GAGAAACTCG AGGCCCTGGA TAACGACCGT
ATGCCCATCA AGGGCCTGTA CGTGGGCGGC TGCGACACGG GCAGCCTGTA CGGTGACTCC
TACGACGTGG CCACCGCTCC CGGCAGCCAG GCGTCGTGGG CCATCAACTC CGGCTGTCTA
GCCATGAAGA ACGCCGCCGA GTACCTGCAG ACCCTGTAG
|
|---|
| Protein sequence | MPLIGGGGTG MAVTIQATEL GLNVVLLEKA GALGGAFSAT EGMFGVGSHW QEEAGEHGTV
GEAVRRCVNY HHYVPSTELY YNFFNQTAET IQWLEDHDCT FRAVVDYGGN LAWHVYYYDE
NASSPGAYFT DSLIKATEAT GADIRLPCGA RKILVEDGAV KGVIAANADG SFVEIDAPVV
MLASGGYASN MDFLHAVSPY TVNKNLVSLG APGRDGDGMR MGVDAGVALS EGYGTVMWCG
PAAIGAQWTT DAYSASVQPT LWVNQNAKRF IAEDLWIGNF AAGGIACRDQ ELTYVIFREQ
DLAAWEQNGP YGTVFTFGTP GVPMDEARAQ LEALPSVHVA DTIEDLEAAV GLDPAALKAT
VDEYNGFCAS GEDPIFGKAA DYLTPIDEGP FWILVVADGY YTTVGGLEIN EKLEALDNDR
MPIKGLYVGG CDTGSLYGDS YDVATAPGSQ ASWAINSGCL AMKNAAEYLQ TL
|
|---|
| |