Gene Shel_07250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07250 
Symbol 
ID8394616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp844480 
End bp845745 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content61% 
IMG OID644985486 
Productpredicted GTPase, G3E family 
Protein accessionYP_003143132 
Protein GI257063460 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GCTCGCTCGT GAAGGTAGCA ATCATCACGG GATACTTGGG AGCAGGCAAA 
ACGACCCTGC TCAACCACAT TCTTACCAAT GCGGAAGGCA TCCGTGCGGC GGTCATCGTC
AACGACATCG GCGAGGTGAA CATCGACGCC GAGCTTATCG CCAAGACCGG TGCGGTGACG
CAGATGGACG ACAGCCTGAT TCCCATGACC AACGGCTGCA TCTGCTGCTC GCTGTCCGAG
GACCTGTCCA ACCAGCTCAA CGACCTGGCC AATTCCGGTA ACTTCGACTA CATCGTCATT
GAGGCGTCGG GCGTGTGCGA GCCCATGCCC ATCGCCTACA CCATCCAGGC GTTCTGCCAG
GCGGGCGAAG AGGACGATGC GCCCATGCTG CTGGACAACG TCATCTCCGT GGTGGACTGC
GCTCGCCTGC TGGACGAGTT CAACAGCGGC CGCGACCTGC TGGACGGCGA GGACGACATC
GTGCAGCTGT TGGTGGAGCA GATCGAGTTC TGCTCGACGC TGGTGCTGAA CAAGACCGAC
CTGGTGACCG ATGAGCAGGT GGCCGAGATT CGCGCCATCG TGCGCAGCCT GCAGAAGAAG
GCCGTCATCG TCGAGGCTGA AAACGGCCAG GTGGATTTGG ATGAGCTGCT CAACACCGGC
CGCTTCGACT TCGAGCACGT GTTCGACTCG GTGGGCTGGG TGAGCGCCAT GGACGAAGCC
GACGCCGAGG CCCGCGAGCG CGAAGAGCAC GAACACGAAC ATGAGCATCA TCATGACCAT
GACCATGACC ATGACCACCA TGGGCATCAC CATCACCACC ATCACGATGA TGACGAAGAG
TGCGACGACC CCGAATGCCA CTGCCACCAC TATCACCATG GGCACGACCA CGACCATGTG
GCCGAATTCG GCATCTCCAC CTTCGTGTAC CAGCGCCGCC GCCCATTCCG CGAGAACGCC
CTGGACCAAA TGGTGGAGGA TTGGCCGAAG GGCATCCTGC GCTGCAAGGG CATGGTGTGG
CTTTCCGAGG ATTCCGACAT GTGCTACGTG TTCGAGCAGG CGGGGCACCG TTTCTCGCTG
GGCGAGAACG GCCTGTGGCT GGCCACGGCT GACGAGGAAT ACCTGGCGCA GCTGGCCGAA
ACCGAGCCCG ACGCCCTGAA GGGCTGGGAC GACGAAGTTG GCGACCGCGA AATCAAGCTG
GTGTTCATCA CCCGCGGCGC CGATCAGGAT GCCATCGAGC AGTGGGCCGA CAGTTTCTTG
GCATAG
 
Protein sequence
MAKGSLVKVA IITGYLGAGK TTLLNHILTN AEGIRAAVIV NDIGEVNIDA ELIAKTGAVT 
QMDDSLIPMT NGCICCSLSE DLSNQLNDLA NSGNFDYIVI EASGVCEPMP IAYTIQAFCQ
AGEEDDAPML LDNVISVVDC ARLLDEFNSG RDLLDGEDDI VQLLVEQIEF CSTLVLNKTD
LVTDEQVAEI RAIVRSLQKK AVIVEAENGQ VDLDELLNTG RFDFEHVFDS VGWVSAMDEA
DAEAREREEH EHEHEHHHDH DHDHDHHGHH HHHHHDDDEE CDDPECHCHH YHHGHDHDHV
AEFGISTFVY QRRRPFRENA LDQMVEDWPK GILRCKGMVW LSEDSDMCYV FEQAGHRFSL
GENGLWLATA DEEYLAQLAE TEPDALKGWD DEVGDREIKL VFITRGADQD AIEQWADSFL
A