| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06880 |
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| Symbol | |
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| ID | 8394580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 804766 |
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| End bp | 805626 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985450 |
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| Product | amino acid-binding protein |
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| Protein accession | YP_003143096 |
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| Protein GI | 257063424 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0612376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.365115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA ACCTGTACAC CCGCCGCAAC GTCATCGCAA TGGGCATGAC CGCTGCTGCT
TCTGTTTCTT TGTTTGGTCT CGTCGGCTGC GGCGGTGGCG GTGCCGAAGA AGAAGGCGCT
TTCATCGTCG GCTTCGACGC GGAGTATCCT CCTTATGGCT ATCTGGCCGA CCCTGACGAA
GAAGGTTACG TCGCCGATGA CGGTCAGACC TACACAGGCT TCGACCTCGA CCTGGCCAAT
GAGGTCTGTG CCCGCAACGG TTGGACTCTG AAGGTCCAGC CCATCGATTG GGACTCCAAG
GACGCCCTGC TCGGCTCCGG CGACATCACC TGCATCTGGA ACGGCTTCAC TTACGAAGGC
CGCGAAGACC AGTACGCATG GTCCGAGCCC TACATGATTA ACGCCCAGGT CGTCGTCGTG
AAGGCCGACT CCGACATCGA CTCCCTGGAA GATCTGGCCG GCAAGAATGT CATCACCCAG
GCAGGTTCCG CAGCCCTCAC GCTGCTGTCT CCCGATGGCG ACTACGCCGA TCTGGCAGCC
ACCTTCAACG GCGGAGCGGT TTCCACCATC GCCGCTTACA CCACCGCGTT CATGCAGCTC
GAACAGGGCA CCGTCGACGC GGTCGCCTGC GACCTGTCCA TCGCCATCAG CCAGATGAAC
GCCAATCCGG ATGCCTACAA GCAGCTGGAC GAGCAGCTGA GCTCCGAGCA CTACGCCGTC
GGCTTCGCCT TGGGTCAGGA GGACATGGCC CAGACCGTTA CCGACACGCT GAAGGAAATG
GACGCCGAAG GCTTCGTCGA GGAGCTGTGC GCCAAGTACG AAGGCGATAT CGATTACGCC
AACTGGTGCC TCGGCGCATA G
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| Protein sequence | MAKNLYTRRN VIAMGMTAAA SVSLFGLVGC GGGGAEEEGA FIVGFDAEYP PYGYLADPDE
EGYVADDGQT YTGFDLDLAN EVCARNGWTL KVQPIDWDSK DALLGSGDIT CIWNGFTYEG
REDQYAWSEP YMINAQVVVV KADSDIDSLE DLAGKNVITQ AGSAALTLLS PDGDYADLAA
TFNGGAVSTI AAYTTAFMQL EQGTVDAVAC DLSIAISQMN ANPDAYKQLD EQLSSEHYAV
GFALGQEDMA QTVTDTLKEM DAEGFVEELC AKYEGDIDYA NWCLGA
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