| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06540 |
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| Symbol | |
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| ID | 8394546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 765789 |
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| End bp | 766535 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644985416 |
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| Product | spermidine synthase |
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| Protein accession | YP_003143062 |
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| Protein GI | 257063390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCCAA GGCGTTGCAA GAGGTATGTT TCCGAAGCAA CGGCATGTCG CAGGCTGCTT
GCCTCGCCCC AGACCATGTT CGGCATGGCG CTCGTTTTCG ATACTGAAGA TGAAACGGGC
AGGGCAATCC GCGTGCTTGA GGTTGAGGGT ACGTGGGAGT CAGTCGCCTA CTTGGATGAA
CCGTTTGAAC TGGCCTTAGA TTACACCAAG GCTTTCGACG TCCTGTTCGA AACGGTGCCG
AAACCGTGCC GTATTCTTGC GATCGGATGC GGAGGGTTCT CATATCCGAT GCATCTTGCG
GATGTGTCGA GCGCTCGAAT CGACGCTGTT GAGATAGACC CGGCCGTTAT CGATTTAGCT
CGGGAGTTTT TCGGGCTTGA CGAGGCTGAG CGACGCTGGG GAGCGGAAGG CGACGGTCGG
TTGCGCGTCG TGTGCGAAGA CGGCCGAGCG TGGTTGGATT CCTGTGCTCC GGGGTCATAC
GACGCCATCG TCAACGACTC GTTTTCTGCA GGAATGCCTG CCGAGGGCCT TGTCACGTCC
GATGCTGCGC TTGCAATTCG CCGGGTCCTT TCGTCTCATG GGGTGTATGT GGTTAATGTG
GTCGCATCGC TTGAAGGGGA GGCGTCGCAC ATTCTTTATG AGCACATCAC GGTTCTCGAG
CGCGTGTTTT CGGAAATCGA GGTGCATCCT GTATATGCGC TGCCTCCTGG GGTTCCCGGA
AACATCATCC TTGTCGCCCG TCCTTAG
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| Protein sequence | MRPRRCKRYV SEATACRRLL ASPQTMFGMA LVFDTEDETG RAIRVLEVEG TWESVAYLDE
PFELALDYTK AFDVLFETVP KPCRILAIGC GGFSYPMHLA DVSSARIDAV EIDPAVIDLA
REFFGLDEAE RRWGAEGDGR LRVVCEDGRA WLDSCAPGSY DAIVNDSFSA GMPAEGLVTS
DAALAIRRVL SSHGVYVVNV VASLEGEASH ILYEHITVLE RVFSEIEVHP VYALPPGVPG
NIILVARP
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