Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06250 |
Symbol | |
ID | 8394517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 729617 |
End bp | 730387 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644985387 |
Product | predicted transcriptional regulator |
Protein accession | YP_003143033 |
Protein GI | 257063361 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTTG ATCGGGCGGG TTTCGGGAAA ACGATTCAGG CGCTGCGCAA ACATGCGTCG GTGACCCAGG GCGAAGTGGC GTCGCGGGTT GGCGTGACCG ACAAGGCCGT GTCGAAGTGG GAGCGGGGAG AGGCTCTTCC CGCGGCGGAG TCCTTCGCCG CATTGGGCAA GGCCTTGAAC GTGCCGGCCC TCGTGCTGTT CGAAGCCATG GAGCCTGAAT CGGAACAGGG GCAGGCCGCA CGGGCTCTTC CGCAGGCGGC GTTGCTGTCG TTGGGCATCG AGCCGAAGGG GTTCGAGCAC ACGAGGCTTC TGATCCGCCG GCCGTATACG GATACGCTGC AAAAGCTGTC CCGGACGCCC CCGTTTTTGT TCGAGCGGCT GTATCTGCAG CCGTCCCATG CCGGCCGTCC GCTGCTCGTG CGGCAGACGC AGAACGACAT CAGGCTCCAT GTGTACGCCG TCATGAAAGT GCAGGCCCAC GTGTCGGAGG CGCACGTCAT CTCGCGGAGC CAGTATGACG ACCTGGTCTC GTTCGCCGAC GAGAGCCTGG CGCCCTACGC CTCGCAGGTC TGGGTGTTCT CGCGCGGCGG CCAGATGGCG GCCTGCGAGC TGTTCGAGTT CTTCCCCTAC ACGGCCGTGC TCACGGTGTT CCACGCGCCG GGGGAGGAGC CCGTGATCCC GGCGCACATC AACGTCGTGC GACGGTTGGA GGAAGACCGG CATTTCGACC CGCTGTACAT GGCCCGCGCC TTGGCCCAGG GCAAGCTGTA G
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Protein sequence | MPVDRAGFGK TIQALRKHAS VTQGEVASRV GVTDKAVSKW ERGEALPAAE SFAALGKALN VPALVLFEAM EPESEQGQAA RALPQAALLS LGIEPKGFEH TRLLIRRPYT DTLQKLSRTP PFLFERLYLQ PSHAGRPLLV RQTQNDIRLH VYAVMKVQAH VSEAHVISRS QYDDLVSFAD ESLAPYASQV WVFSRGGQMA ACELFEFFPY TAVLTVFHAP GEEPVIPAHI NVVRRLEEDR HFDPLYMARA LAQGKL
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