| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06080 |
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| Symbol | |
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| ID | 8394500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 709087 |
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| End bp | 710280 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985370 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003143016 |
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| Protein GI | 257063344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.54235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC CGCTGGTCGA GATGGACGGC GACGAGATGA CACGCATCCT CTGGCAGATG
ATCAAAGATG ACCTCATCTG CCCGTTTGTC GATTTGAAGA CGGAATACTA CGACCTGGGC
CTGGTACACC GCAACGAGAC CGACGACCAG GTCACTTTCG ATTCGGCCGA AGCCACCAGG
CGTCTGGGCG TAGCCGTCAA GTGCGCCACC ATCACGCCGA ACGCCGCCCG CGTCGAGGAA
TATGACCTCA AGCAGATGTG GAAGAGTCCC AACGGCACCA TCCGCGCGGC GCTGGACGGC
ACCGTGTTCC GCGCGCCCAT CGTGGTGAAG GGCATCGAGC CCTGCGTGCG CAACTGGAAG
AAGCCCATTA CGCTGGCCCG TCACGCGTAC GGCGACGTGT ACAAGAACGT TGAGATTCGC
GTGCCCGGCG CCGGCAAGGT CGAGCTGGTC TATACCGGCG AAGACGGCAC TGAAATCCGC
GAGCTGGTGC ACGAATACGC AGGTCCTGGC GTCGCTCAGG GCATGCACAA CCTGGATTCG
TCCATTGAAA GCTTCGCGCG CAGCTGCTTC AACTACGCGC TGGACACGCA TCAGGACGTG
TGGTTCGCCA CAAAGGATAC CATCTCCAAG AAGTACGACC ACCGCTTCAA GGACGTGTTC
CAGGAGATTT TCGACGCCGA GTATGCCGAC CGCTTTGCCG AAGCGGGCAT CACCTACTTC
TACACGCTGA TCGACGACGC CGTTGCCCGC GTCATGAAGG CTGAGGGCGG CTTCATCTGG
GCGTGCAAGA ACTACGACGG CGACGTTATG TCCGACATGG TGTCGAGCGC CTTCGGCAGC
CTGGCCATGA TGACGTCCGT GCTGGTGAGC CCTGCGGGCG TGTACGAGTA CGAGGCCGCC
CACGGCACGG TGCAGCGCCA TTACTACCGC CATCTGAAGG GCGAGGAGAC CTCCACGAAC
TCCGTGGCCA CCATCTTCGC GTGGACGGGT GCCCTGCGCA AGCGCGGCGA GCTGGATGAA
CTGCCCGAGC TTTCGGCATT CGCCGACAAG CTGGAAGAGG CCACGCTTGC CACCATCGAG
AGCGGCCGCA TGACGAAGGA TCTGGCGCTG ATCACCAGTC TGGAAGACGT GCAGGTGCTC
AACAGCCGCG AGTTCATCGA GGCCGTCGCC GAGGAGCTGA AGACCCGCCT GTAG
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| Protein sequence | MKTPLVEMDG DEMTRILWQM IKDDLICPFV DLKTEYYDLG LVHRNETDDQ VTFDSAEATR
RLGVAVKCAT ITPNAARVEE YDLKQMWKSP NGTIRAALDG TVFRAPIVVK GIEPCVRNWK
KPITLARHAY GDVYKNVEIR VPGAGKVELV YTGEDGTEIR ELVHEYAGPG VAQGMHNLDS
SIESFARSCF NYALDTHQDV WFATKDTISK KYDHRFKDVF QEIFDAEYAD RFAEAGITYF
YTLIDDAVAR VMKAEGGFIW ACKNYDGDVM SDMVSSAFGS LAMMTSVLVS PAGVYEYEAA
HGTVQRHYYR HLKGEETSTN SVATIFAWTG ALRKRGELDE LPELSAFADK LEEATLATIE
SGRMTKDLAL ITSLEDVQVL NSREFIEAVA EELKTRL
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