Gene Shel_05620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05620 
Symbol 
ID8394454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp652475 
End bp653203 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content58% 
IMG OID644985324 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003142970 
Protein GI257063298 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG AAATCAAGCA GGCTGAAGCC GAAACCAATG CGCCGTACGG AGAAATCATC 
GACGCATTGC GCGGACGCAA CGCCTTTTAC GATATGTTCG CGAACGTGTA CTTCAAGCCG
CTGACGGCCG AACAGGTCGA GAACTTCGCC AACACCGATT TTTCGGCGTA CGAAGACATT
AACGAGCAGT TCGCCGACGG CGTGAACGAC ATCCGCCGCT ATCTGGCCAA ACGCAATTCC
GGTACCCGTC AGGAGCTGGC TGTCGATTAC ACTGGTGCAT TCGGCAGCAC GTCGTCGTGG
AAGGGCCGCT ATGCCGCGCC GTACGAATCC GTCCACACCA GCGAAGAGGG GCTCATGTAC
CAGGGCGCCT ACCACGAGGT GTTCCAGCTG TACAAGCAAC ATCATGTGGT GCGCGCAGAA
GGGTACGACT ACCCGCATGA CCACCTGTCG TTCATGTGCG AGTTCCAGGT GATTCTGGCC
GAACGGGCCA TCGAGGCCAT GGAGGCCGGC AATCCGGAAG AGGCGCTCAA GCAGATCAAA
GCGTCCCAGG GATTCCTGGA GGACCACATC CTTTCGTGGT TCGACGATTT GGCCGACTTG
GCCGTGAACC TGCTGCACAC GCGTTTTTAC CGTGGCATCC TGAAGATTTC GAAGGGCTTC
TTCCTATTCG ATCAGCAACT GCTCGCCGAC ATCGCGGAGG TGCTTGAGGA GCAGGTCCAG
GAGGCGTAA
 
Protein sequence
MSEEIKQAEA ETNAPYGEII DALRGRNAFY DMFANVYFKP LTAEQVENFA NTDFSAYEDI 
NEQFADGVND IRRYLAKRNS GTRQELAVDY TGAFGSTSSW KGRYAAPYES VHTSEEGLMY
QGAYHEVFQL YKQHHVVRAE GYDYPHDHLS FMCEFQVILA ERAIEAMEAG NPEEALKQIK
ASQGFLEDHI LSWFDDLADL AVNLLHTRFY RGILKISKGF FLFDQQLLAD IAEVLEEQVQ
EA