| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05600 |
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| Symbol | |
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| ID | 8394452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 648724 |
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| End bp | 651663 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985322 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003142968 |
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| Protein GI | 257063296 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.533202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT CTAATCTGAC TCGTCGAAGC TTCATCAAAG CGGCAGGCTT TACGGCGGCT
GCTTCGGCCA TCGGCGCGTC GCTGGCCGGC TGTATGCAGT CCGATGGCGG TTCCGCCGAA
GGCGAAGGCT CTGCCGACGG CAACGTAAAG TCCTCTGAGG GCGTTACGTT CTCGACGCAC
ATCGACTACG ACACGAAGCT GCGCACCTCG TGCCATGGTT GCATCCAGAT GTGCCCGGCC
ATCGCCTACC TGAAGGACGG CGTGGTCGTC AAGCTCGAGG GTGACCCCGA GGCGCCCGTG
AGCCGCGGCT CCCTGTGCAT CAAGGGCCTC AACCAGGTCC ACACTATGTA CAGCCCGCGC
CGCGTCCTGC ATCCGCTGCG CCACATCGAG CGCGGCACCA ACAAATGGGA GCAGATCAGC
TGGGACGAGG CCATCGACGA GGCCGCCCAG CACATCGCTG ATGCCATCAA CGAGTACGGC
CCGTATTCGT TCTTCGCAAG CGTCGGCGGC GGCGGCTCCT ATTCGTTCAT GGAGGCCATG
ACCCTGCCTA TGGCTCTGGG TTCGCCCACC GTGTTCGAGC CGGGCTGCGC GCAGTGCTAC
CTGCCCCGTT GGGCTCTCTC CAAGCTGTTC TACGGCGGCG ACGACCAGTC CATCGCCGAC
AACGCAGTTC AGGAGATCTT CCGTCCTGGC GACGACAACA AGGCCGAAGT GGTCGTGATC
TGGGGCGCCC AGCCGTCCGT TTCCGAAACC GCTGAATCCG GCCGCGGCAT GGCCGAGCTC
CGCGCTGCGG GCGTCAAGAC CATCGTCGTC GACCCGAACT TCAGCCCTGA CGCGGTTCAC
GCCGACATCT GGCTGCCCAT CCGTCCGGCA ACCGACACTA AACTCATCCT GTGCTGGTTC
AACTACATCT TCGAGAACAA GCTGTACAAC GAGCAGTTCA CGAAGTACTG GACCAACCTG
CCGTTCCTGA TCGACCCGGA CACCAAGCTG CCCGTCAAGG CTCAGGAGCT GTTCCCGGAC
TTCGAGCAGA CCACGCCCGA GCACACGCCG GCTTATGTCT GCTACGACCT GAAGACCAAC
GCTGTTGCTC CCTTCGAGTA CAGCGCTCCT GCCGACAGCG CCGTCGACCC CGAGATCTTC
TGGGAAGGCG AGTTCAACGG CAAGACCTAC AAGACCGCCG GCCAGATTTA CGCCGAAGAG
GCTGCTCCTT GGACGCTTGA GAAGACCGCC GAGGATTGCT GGCTTGAGGC CGACAAGATC
GAAGCTGCCA TCCGCATGTA CACCCATGCC GACGACGGCG GCCCGATTGA CCATGTTGCC
GGCATCGCCA ACGGCGTTGC TTCCGACATG ACCGAGTCCG CCAGCCAGGT GCCTATCGGC
CTGATGGGCC TCGACTCCAT CATGGGCTAC ATCAACAGGC CCGGCGCCAC CATGACCCAG
AAGGGCGGCG GCTACTTCAC CGACGCGACG GGCACCCAGT CGCTCAAGCG TCAGTACACC
TTCAACAACG GCTTCGGCGG CATGTTCAGC GCCATGTACG GCATCGGCGC CGTCATCGGC
CTGTCGGATG AGCAGAACGA AGCCTGGGCA CGCGGCGAAG AGACCCCGGC CGGCGTCGCC
GACGTCAGCC AGCAGGAGCT CGCCAACCAG CTGCTCCTCG ACCGTATCGG CATGAAGGAC
CACAAGGGCC TGTATGCTTG GTGCCACAGC CACATCCCCA GCGTCCGCGA AGCCATCGCA
ACCGGCGAGC CCTTCAAGCC TCGCGTCTGG TTCGACATGT CCGGCAACAA GCTGGCCATG
CTCGGCAACG CCAAGAGCTG GTATGAGGTC TTCCCCGAGG TCGACTACAT CATCACCCAG
TACCCGAACA TCACGTCGTT CCAGTTCGAA GCTGCCGACC TCATGTTCCC GCTGCGTGAG
TGGCTGGAAG AGCCCATGGT CAACATGACC CAGCTCGACA CCCAGTGGCT GCAGAACGAA
TGCACCCACA TCGGCGAGAC CGTATCCCAC AGCATCCCCG CCGCTCAGGT TCTGGCGAAG
GTCGCCGAGA AGCTCGGCGG AGACCTGCCT GGCTTGAAGC CCGGCTATCT GGGCAACCCC
ACCGAGCAGG CGAACAAGGA TTCCGTCGCC GCCACGCTGG GCGCTCCCAG CTGGGATGAA
CTGATCGCCA ACACCGACCA GTACGTGCCG CACATCACCG AGGGCTACTT CAACTACAAC
CAGCACGAAG TCCTCGCCGA GGATGACGAC AACCTGCCCA TCGGCTTCGC CACTGAGTCC
CGTAAGATCG AGACCTACTG CCAGATTCTG CTGCGCACGG CCCGCACCGG CTATCCGTAC
TGCTACCCCA AGCCGCAGGA AGCCTGCGAC GACTACAGCC CGATCTGCGT GCCCATCGAA
CCCTGCGAGA GCCCCTATTC CGAGGCCGAG CAGCAAATCG CCGACCGCGA AGAGTACCCG
TTCGTGCTCA CCAGCGGCCG TGTTCCGTAC TTCCATCACG GCACCATGCG CCATGCCGCG
TACAGCCGCG AGCTGTTCCC CTGCGCCGAG ATCCGCATCA ACCCGGCCAG CGCTGCCGAG
CTGGGCATCG AACATATGGA CTGGGTCAAG GTCACGAGCC GCCGCGGCGA GATCCATGCC
CGCGCATGGC TCACCGAGGC CATCAATCCG CATACCGTTT GGATGGAGCG CTTCTGGAAC
CCCGAGGCAT TCGACGAGTC CCAGGCCAAT CCGGACGGTG GCTGGCGCCA GATGAACGTC
AACGTGCTCA CCAAGAACAC GGCGCCGTTC AACGAGGTGT TCGGTTCTTA CACCAACCGC
GGCTTCACCG TTAAGATCGA GAAGTCTGAG AAGCCCGAGA ACGTGTGGGT CGAACCCGAG
GAGTTCCAGC CGTTCATGCC CACCCTGCAA GGCGAAGCTA GGACGGAGGA TGTATTCTAA
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| Protein sequence | MTKSNLTRRS FIKAAGFTAA ASAIGASLAG CMQSDGGSAE GEGSADGNVK SSEGVTFSTH
IDYDTKLRTS CHGCIQMCPA IAYLKDGVVV KLEGDPEAPV SRGSLCIKGL NQVHTMYSPR
RVLHPLRHIE RGTNKWEQIS WDEAIDEAAQ HIADAINEYG PYSFFASVGG GGSYSFMEAM
TLPMALGSPT VFEPGCAQCY LPRWALSKLF YGGDDQSIAD NAVQEIFRPG DDNKAEVVVI
WGAQPSVSET AESGRGMAEL RAAGVKTIVV DPNFSPDAVH ADIWLPIRPA TDTKLILCWF
NYIFENKLYN EQFTKYWTNL PFLIDPDTKL PVKAQELFPD FEQTTPEHTP AYVCYDLKTN
AVAPFEYSAP ADSAVDPEIF WEGEFNGKTY KTAGQIYAEE AAPWTLEKTA EDCWLEADKI
EAAIRMYTHA DDGGPIDHVA GIANGVASDM TESASQVPIG LMGLDSIMGY INRPGATMTQ
KGGGYFTDAT GTQSLKRQYT FNNGFGGMFS AMYGIGAVIG LSDEQNEAWA RGEETPAGVA
DVSQQELANQ LLLDRIGMKD HKGLYAWCHS HIPSVREAIA TGEPFKPRVW FDMSGNKLAM
LGNAKSWYEV FPEVDYIITQ YPNITSFQFE AADLMFPLRE WLEEPMVNMT QLDTQWLQNE
CTHIGETVSH SIPAAQVLAK VAEKLGGDLP GLKPGYLGNP TEQANKDSVA ATLGAPSWDE
LIANTDQYVP HITEGYFNYN QHEVLAEDDD NLPIGFATES RKIETYCQIL LRTARTGYPY
CYPKPQEACD DYSPICVPIE PCESPYSEAE QQIADREEYP FVLTSGRVPY FHHGTMRHAA
YSRELFPCAE IRINPASAAE LGIEHMDWVK VTSRRGEIHA RAWLTEAINP HTVWMERFWN
PEAFDESQAN PDGGWRQMNV NVLTKNTAPF NEVFGSYTNR GFTVKIEKSE KPENVWVEPE
EFQPFMPTLQ GEARTEDVF
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