Gene Shel_05220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05220 
Symbol 
ID8394414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp609251 
End bp610084 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID644985284 
Productuncharacterized Fe-S protein 
Protein accessionYP_003142930 
Protein GI257063258 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAG AGCTGATCCG CCAGGCTGCG GCGGAGCTTT ACAAGCAGCT GCCAGGCAAC 
ATTCTTGACG AAGCCATGGA CATCTTGCCC GAGCATGTGG GCACCCGCAT GTTCGACGAG
CCCCTCGTGG GGTTCGGCGG GGCGGACGAC GCTCTGTTCG ACGAGTACAA GAAAGTCGGC
GTCATCGGGC CGTGGCACAT GAGCCCCGCC GAATGGCTGC CCCAGGCGAA AACGGTGGTC
TCGCTGTTCT TTCCCGCAAG CCTCGAGGTG CGCCAAAGCA ACCGACGCGC CAAAGAGAAG
GCTTCCGACC TGTGGGCGTA CGCCCGCATC GAGGGGCAGG CGTTCATCGG GTCGTACATG
GCCGCGCTGC AAGGGTGGTT CCGGGAGCTC GGCGTCGAAG CCTGCGTGCC TGCGCTTGAT
CCGCGGTGGC TGGCCGTGCG GGCAGGCGAA GGCATCGAGG GCTATCCGGA GATTCGCGAA
GACACTTACG GCAGCAACTG GTCGGAGCGC CACGCGGCGT ACGTGTGCGG GCTGGGCACC
TTCGGTCTGT CCAAGGGCCT CATTACGGAA AAGGGCATGG CGGGCAGGTT CGGAAGCATT
TTGATAGATG CGAAATTGGC TCCTGACCTG CGGCCTTACT CGGGTATTTA CGATTACTGC
ACCCGGTGCG GAGCCTGCAT CAAGCGCTGC CCCGTTGCGG CCATCGACTT GGAGCACGGT
AAGGACCACA CGGTCTGCGG GCCGTTTCTT GCGCTGTCGC GCACCCTGCT GGCGCCCCGC
TACGGATGCG GATTATGCCA GACCGGCGTG CCCTGCGAGA CCCGGATTCC ATAA
 
Protein sequence
MDKELIRQAA AELYKQLPGN ILDEAMDILP EHVGTRMFDE PLVGFGGADD ALFDEYKKVG 
VIGPWHMSPA EWLPQAKTVV SLFFPASLEV RQSNRRAKEK ASDLWAYARI EGQAFIGSYM
AALQGWFREL GVEACVPALD PRWLAVRAGE GIEGYPEIRE DTYGSNWSER HAAYVCGLGT
FGLSKGLITE KGMAGRFGSI LIDAKLAPDL RPYSGIYDYC TRCGACIKRC PVAAIDLEHG
KDHTVCGPFL ALSRTLLAPR YGCGLCQTGV PCETRIP