Gene Shel_04930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04930 
Symbol 
ID8394385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp580114 
End bp580551 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content62% 
IMG OID644985256 
Producthypothetical protein 
Protein accessionYP_003142902 
Protein GI257063230 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC TCGACCTGAC CAATGCCGCT CTTCCCGAAG GTGCCACCCT CGAAGAGGTG 
CAGGCTGTGT TCGTTCGCGA CCGCTTCGCG CAGACCGCCT GCAACGAACC GGAGATCCTT
ATCGCCGAGA AGGGCCACGC CAAGGTGCGC ATGGACGTAA CAGAGGACCA CGTCAACGTG
AAGCGGACCG TCATGGGCGG CGCCATGTTC ACGCTGGCGG ACTACGCCTT CGCCATCGCA
TCCTGCATCG GCCAGGCGCC CACGGTGTCA GTAACCTCCA CTATCGAGTT TCTGAACGCC
GGCACCGGCA ACGAGATGTA TGCGGAATGC ACGATGGACA AGATGGGCCG CAGCATGTGC
TACGCCGATG TCAAAGTGAC CGACGAGAAC GACCGCGTGC TGGCCATCGT GAAGATGACC
GGGTACCGCC TAGGCTAA
 
Protein sequence
MPQLDLTNAA LPEGATLEEV QAVFVRDRFA QTACNEPEIL IAEKGHAKVR MDVTEDHVNV 
KRTVMGGAMF TLADYAFAIA SCIGQAPTVS VTSTIEFLNA GTGNEMYAEC TMDKMGRSMC
YADVKVTDEN DRVLAIVKMT GYRLG