Gene Shel_04350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04350 
Symbol 
ID8394327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp519918 
End bp520985 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content60% 
IMG OID644985199 
ProductYeeE/YedE family protein (DUF395) 
Protein accessionYP_003142845 
Protein GI257063173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217444 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGTATC TATCAGGCCT GATTGTAGGC GTGCTGTTCG GCATCTTCCT GAAGAAGAGC 
CGGTTCTGCC TTACGGGCCT CATCCGCGAT ACGTATATGG AGAAGAAACC GTATAACGCC
GTTATCGTTT TCTCGATCAT AGCCGTGCAG GGCCTGATCT ACCACAGCCT GGCCCATGCT
GGCCTCATAC GCCTGCCGTC CTACCTGCCC CCGTTTTCGC TGGTGTCGAT CGCAGTGGGC
AGCCTGTTGT TCGGCATCGG AGCCGTTGTT TCCAGCGGAT GCATCGCCTC CACGTTGGTC
AAGTGCGGCG ACGGCCGTAT TGCGGGACTC ATCTCGCTGG CGACGTTCAT GGTGACGGGC
TACGCCCTGT CCGCCGGTCC CTTGGTGGAA CTGTCGAAGG CGATTCGTTC GGTTGCCATC
GTCGATGACA ACCTTGCGAT TCGCACGACT GTGGCTCCCA TCGTGATCTG CGGCGTGGCC
AGCGTTGTGC TGATCGCTGT CATGGTGCGT TACCGCATGA CCCACAAGCC GAAATTCAGG
ATCCCCGGCC GCTATACGGG CGTTCGCCAC ATCCTGTTCG AAAAGGTGTG GCCGGTCGAG
GTTTCCGCGG TGCTCATCGG CATTCTGGCC GGCTTCGCGT TCCTGATCAG CGGGCATTAC
GGACGTCACT TCGGCTTCGC ACTGGTGACG CCGTTGCTGT CCTGGGCTTA CGAGCTTTTG
CAGCCTCCCT TCGTGGTGGG CGGGTGCAAC CCCTACGACA CCGTGTTCGG TTGGGGCTCG
ATGTTCGTTC TGGGCATCGT TTTGGGGTCG CTGATCACCA CGGCGGCAAG CGGCGAGCTC
ACGCCTGTCA TGCCCGACAA GACCACGGCG TTGAAGATGG TCATCGGCGG CGTGCTGATG
GGATTCGGCG GTGTGTGGGG ACAGGGATGC CTGATTGCGA ACGGCCTGGT CGGCACCGCT
CAGTTCTCCC TCAAGTCCTG GTACGCCCTT GTGTTTCTGG TGGCGGGCAT CTGGCTTGCA
ACCCGGTTGT ATCTGATGCC GTCGCTGCAG AAAGCGAGCA AGAACTAA
 
Protein sequence
MMYLSGLIVG VLFGIFLKKS RFCLTGLIRD TYMEKKPYNA VIVFSIIAVQ GLIYHSLAHA 
GLIRLPSYLP PFSLVSIAVG SLLFGIGAVV SSGCIASTLV KCGDGRIAGL ISLATFMVTG
YALSAGPLVE LSKAIRSVAI VDDNLAIRTT VAPIVICGVA SVVLIAVMVR YRMTHKPKFR
IPGRYTGVRH ILFEKVWPVE VSAVLIGILA GFAFLISGHY GRHFGFALVT PLLSWAYELL
QPPFVVGGCN PYDTVFGWGS MFVLGIVLGS LITTAASGEL TPVMPDKTTA LKMVIGGVLM
GFGGVWGQGC LIANGLVGTA QFSLKSWYAL VFLVAGIWLA TRLYLMPSLQ KASKN