Gene Shel_04160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04160 
Symbol 
ID8394308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp495285 
End bp496136 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content61% 
IMG OID644985180 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003142826 
Protein GI257063154 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.651285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTACA TCACCACGCA AGATGGAACC AAGCTTTACT ACGAAGACCG TCCCGCAAAA 
GACCAGGCCA ACGCCTCTGC CGAGGACCTG CTCATCATCC ATGGATTGGG TTCGTCCCAC
TATGACCTGG CGCAGTTCAT CGACGATTTG AACGAAACCC ATCGCGTCGT CTTCTACGAC
CAGCGCAACC ATGCGGACTC CGACCGCGCT CAGCTTCACT TGAACGTCAA GACCCTCGGC
CAAGACCTCA ACGACGTCAT CGAGCAGCTT GACCTGCGCG ACATCAACGC TTTCGGTCAC
TCCATGGGTG CCGCTGCCAT CTTCAGCTAC GTCAACCAGT ACGGCACGGA GCGCCTATCC
AGCATCGGCA TTGCAGACAT GTCCCCCTAT TTGAGCAATG CCGATTGGAA GGGTGGCATC
AGGCAGGGCA CCTGGACCGA CAAGGATTTC ATGGGCGACA TGGACCGCCT GTTCGACGAC
GCGGCTTGGG GAGCCTGGCA CATCGCCAAA ACCCTTATGA ATCCGAAACT CCAGGGCATG
CCCGCCGACC AGGAAGCGGC TGCCATCGAA GGCATGCGCC CCAACGCCGA CCCGCTGGGG
TTCCCGGCGC TGTGGTTCTC GCTGTTCTAC ACCGACCAGC GCCCCGCCCT GGCCAAGATC
GACGTGCCCG TGCTCTACCT CATGCCCGAG CTTCCGCTGT ATTCCCACGT GAACGTGGAC
TTCATCGCGA GCCAGGTGAA GGCCGGCTTC ACGCTGGAAG AGAACTTCCC CGGAACCACA
CACCTGATCC TGTCCGAAGC GCCCCACGAG ACGGCTGCGG CTGTCGAGCG CTTCCTGGCG
GCAACCAAGT AA
 
Protein sequence
MPYITTQDGT KLYYEDRPAK DQANASAEDL LIIHGLGSSH YDLAQFIDDL NETHRVVFYD 
QRNHADSDRA QLHLNVKTLG QDLNDVIEQL DLRDINAFGH SMGAAAIFSY VNQYGTERLS
SIGIADMSPY LSNADWKGGI RQGTWTDKDF MGDMDRLFDD AAWGAWHIAK TLMNPKLQGM
PADQEAAAIE GMRPNADPLG FPALWFSLFY TDQRPALAKI DVPVLYLMPE LPLYSHVNVD
FIASQVKAGF TLEENFPGTT HLILSEAPHE TAAAVERFLA ATK