Gene Shel_04100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04100 
Symbol 
ID8394302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp488906 
End bp489364 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID644985174 
ProductK+ transport system, NAD-binding component 
Protein accessionYP_003142820 
Protein GI257063148 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.453544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.632996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC TTGGCGGAAA GCGCGCCGTA GTGGTCGGAT GCGGATCCTT CGGAGCTGCG 
GCGGCGGGAG CCCTTTGCCG GCTTGGATAC AAGACGTCGG TCATCGACAT GGACGTCAGC
GCGTTCAATC GTCTGTCCCC CGACTTCGAG GGGGACACCA TCACGGGCGA CGGAACCAGC
TTCGCCGTGC TGAAGGACAG CGGCGTACAG ACGGCGTCCC TGCTGGTTTG CGCCACGAGC
CACGACACCG CCAACATGCT TGCCGCCGAA GTGGGAAGCG ACGTCTGCGG ATGCGCGAAC
GTGTTCGCAC GCATCAATAA CCAGGCGATT GCAAGCGTTT TGGAAAACCA CAATGTGGAA
GTGATCTGCC CTCACCAAGT CCTCGTGAAA GAGCTTTGCG TGCAGGCCGG ATTCAATGTC
CCCGTTGTCC ACCCCCGGCG GGAAGGCTAC ATCTCGTAG
 
Protein sequence
MSLLGGKRAV VVGCGSFGAA AAGALCRLGY KTSVIDMDVS AFNRLSPDFE GDTITGDGTS 
FAVLKDSGVQ TASLLVCATS HDTANMLAAE VGSDVCGCAN VFARINNQAI ASVLENHNVE
VICPHQVLVK ELCVQAGFNV PVVHPRREGY IS