Gene Shel_03640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03640 
Symbol 
ID8394256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp435740 
End bp436477 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content58% 
IMG OID644985129 
Productamino acid ABC transporter ATP-binding protein 
Protein accessionYP_003142775 
Protein GI257063103 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TCAACAACGT GCATAAATCG TTCAAGCACA ACGAGATTTT AAAGGGGGTT 
TCCCTCCTCG TGGAGGAAGG CGAGGTGGTG GTCGTCATGG GGCCCAGCGG CTCTGGCAAG
ACGACCTTGC TGCGCTGCAT CAACTTCCTC GAACGTGCGG ATGCCGGGTC GCTCACCATT
GGGGACCTTT CGGTCGACCT GCACAAGGCG AGCAAGAAGG AGATCCTTGC CGTCCGAAAG
AAAACGGCGT TCGTGTTTCA GAACTACGCG CTGTTCAACA ACAAGACCGC TTTAGGAAAC
GTTATGGAAG GCCTGATCAC GGCCCGAAAA ATGAACAAGG ACGAAGCGCG CGCCATAGCC
GAGCGCGAAC TTGCCAAGGT CGGTCTGGCC GAAAAGGCGG ACGCGTATCC CAGCCAGCTT
TCGGGCGGCC AGCAGCAGCG CGTGGGCATC GCGCGGGCTG TGGCCTTAAG CCCTGAGGTC
ATCCTGTTTG ACGAACCGAC AAGCGCTCTG GATCCGGAGC TTGTGGACGA GGCGCTGGAC
ATCATCAAGG GGATCGCCCA AGAGGGCGTG ACCATGATCG TGGTGACCCA CGAGATGTCA
TTTGCGCGAG AGGTCGCCGA CAGGGTCGTG TTTATGGAAG GCGGCTACAT TGTTGAGGAA
GGCGCCCCGC AAGACATATT CGTCAACCCG AAAGAGGAGC GCACGAAGCA GTTCCTGAAA
AGGATACTGT CCCGATAG
 
Protein sequence
MIEVNNVHKS FKHNEILKGV SLLVEEGEVV VVMGPSGSGK TTLLRCINFL ERADAGSLTI 
GDLSVDLHKA SKKEILAVRK KTAFVFQNYA LFNNKTALGN VMEGLITARK MNKDEARAIA
ERELAKVGLA EKADAYPSQL SGGQQQRVGI ARAVALSPEV ILFDEPTSAL DPELVDEALD
IIKGIAQEGV TMIVVTHEMS FAREVADRVV FMEGGYIVEE GAPQDIFVNP KEERTKQFLK
RILSR