| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03320 |
|---|
| Symbol | |
|---|
| ID | 8394224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 403575 |
|---|
| End bp | 404759 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985102 |
|---|
| Product | AAA+ family ATPase |
|---|
| Protein accession | YP_003142748 |
|---|
| Protein GI | 257063076 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGT ACTATGTGGG ATCGGTTCGC CTCCCAGCCG ACGTCGACTG GGCTGACGTC
GCAAAGTGCA TTGGCCTCGT ACTCTCGCTC GGTCTCCCCG TGGAGGTCGG CCAAGCGAAG
CAGGCAGAGA ATGGCTTTGT CCTCGGGATC GTGGTTAAGG AGCCGGACCC TCGCTCAAAG
CCAGATACGC CGAGTGCCGA TGACCTGAAG GAGGCTCTGG AACACAACGG CTACAAGGCA
GAGCTTAGGA ATGTCCCTCT CGGTGTCCTC GCGGGTCAAG GGCGGCAGGT CGTAGATGCC
CTCACGCGGC TCGGCGACTC CTCCCGCCTG CGACGGTCTG TGTCGGCGGC AGATGTCGCC
CCGGCGGCCC CCACGGGAGA CATTGGGTCG TCCTTCGACG GCCTCGTCGG GCTGGCTGAG
GTTCGTGAAG GGATTACGGC GGTCGTGAAG GCTGTGAGCA GGTTCGGCCG CGGCTCTCTC
TCCAGCCTTG GGACCGTGTT GCTTGGCCCG CCGGGGACGG GCAAGACCGA GATTGCTCGA
CGGATGGCGG CAGCCTACGG GCAGGCCGGC GTCTCGACCG GGAAGTTCAC CCAGGCTGAC
GCTTCACAGC TCATTTCGGA GTACGTCGGC GAGACGCCCA CCAAGGTGCG TTCCGTCTTC
GACTCTGCAC GCGGTGGCGT TCTCCTTATC GACGAGGCGT ATAGGCTCTC GTCTGCGGAC
GCACATTCCG GGTCGCACGC TCGCGAGGCC CTTCACGCCA TCAACCAGCT CACTGAAGAG
CGACGATCGG ACACCATAGT GGTACTGGCC GGGTACAGGG ACGAGACCAT GGATTTGCTC
TCGCAAAACC CCGGGCTCAA AAGCCGGTTC CCCATCAAGT ACGAGCTGAC AGGATACTCC
GCAGTGGAGC AGAGGGCCAT TTTCTCGCTC ATGGCAGAAC AGCGCGGTTT CAACGACAGG
GTCGACGAAC CGGTCTTTCT CTCCGCCGTC GATAAGCTAA GCCAGAAGGA TGGCTTCGCA
CAAGCGCGAA CAATGCGCAA TCTGGTCGAC AAATGTGTTC TGTCTCTTGC AAGACAGGAT
TCCGTCAGCT TCGAAATCGA CAACGGGGCG TTCGTCAGCG CTGTGAGCGA AGTGTCTCAC
GAACTCGATG TTTCGTCGAC GCGCCGCCGA ATCGGGTTCG TGTGA
|
|---|
| Protein sequence | MATYYVGSVR LPADVDWADV AKCIGLVLSL GLPVEVGQAK QAENGFVLGI VVKEPDPRSK
PDTPSADDLK EALEHNGYKA ELRNVPLGVL AGQGRQVVDA LTRLGDSSRL RRSVSAADVA
PAAPTGDIGS SFDGLVGLAE VREGITAVVK AVSRFGRGSL SSLGTVLLGP PGTGKTEIAR
RMAAAYGQAG VSTGKFTQAD ASQLISEYVG ETPTKVRSVF DSARGGVLLI DEAYRLSSAD
AHSGSHAREA LHAINQLTEE RRSDTIVVLA GYRDETMDLL SQNPGLKSRF PIKYELTGYS
AVEQRAIFSL MAEQRGFNDR VDEPVFLSAV DKLSQKDGFA QARTMRNLVD KCVLSLARQD
SVSFEIDNGA FVSAVSEVSH ELDVSSTRRR IGFV
|
|---|
| |