| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03240 |
|---|
| Symbol | |
|---|
| ID | 8394216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 393436 |
|---|
| End bp | 393969 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644985094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142740 |
|---|
| Protein GI | 257063068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.311324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGGTGC GGTTTCTTAT GGGAAGCAAC TACTCGTTCA GCCACGGCAA AGACATGAGG
AGGGTCGCAT CGGAACTTAT AGAGCGGCAT GCCGGATGGG TCACGCTTTC GAGGGGGCTT
GCAATTCCCG AGACGACGGC TAAGAATTGG ATTCGGAGCT ACAGGGCCGT CGGATCGGAG
GCGTTCATCA ACATGGGCGA TGTCAAGAGG ACCTACGATT ACGAGACGAT GCTTGCTGCC
GTGCTCGACC ACGTCGAGGG CGGGATGACC AGGCAGGAGG TCATGTGCAA GTACAAGATC
GCCAGCAAGA CCTCCATCGA CACGTGGGTG CGCGACTACC GTCGGGGTGG GCCCGATGCG
CTGAAGCCCG CGCCGAAGGG CAGGCCGCCC GGGCCGCAAG GCACGGCCAA GCCCAAGACG
CGAGAGCAGG AGCTCGACGA GGAGAACCGC AGGCTCAGGG CGGAGGTCGC CTACCTAAAA
AAATTGAGGG CCCTGGAAGC GGCAAAGCGA GCACGTGGGA GAAATGCCAG GTGA
|
|---|
| Protein sequence | MEVRFLMGSN YSFSHGKDMR RVASELIERH AGWVTLSRGL AIPETTAKNW IRSYRAVGSE
AFINMGDVKR TYDYETMLAA VLDHVEGGMT RQEVMCKYKI ASKTSIDTWV RDYRRGGPDA
LKPAPKGRPP GPQGTAKPKT REQELDEENR RLRAEVAYLK KLRALEAAKR ARGRNAR
|
|---|
| |