Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02870 |
Symbol | |
ID | 8394179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 345797 |
End bp | 347608 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644985058 |
Product | hypothetical protein |
Protein accession | YP_003142704 |
Protein GI | 257063032 |
COG category | [S] Function unknown |
COG ID | [COG3472] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATC GCTATTCAGT AACCAATTAC TCGGTTCAGA GCATCTTAGG GCTTATCGAG TCGGAGGATA TTGCTATTCC TGAAATTCAG AGGCCGTTTG TCTGGAGCAG CACAAAAGTT CGCGATCTTG TGGATTCGCT TTATCATGGA TACCCAACCG GCTACCTCAT TACCTGGAAA AACCCAGACG TAAAGGTCAA GGGTGGCGGG ACGTCTGAGG GAAAGACGGT TCTTATTGAC GGCCAGCAGC GAGTTACTGC GTTGATGGCG GCGCTTGCGG GTCTAAAGGT TTTGAACGAC GACTACGAAT CCAAGCGTAT AAAGATCGCG TTCAATCCTC TCTACGAAGG TGAGGACACG CCGTTTGCGG TGCTGACGCC GATTATCGAA AAGGATAGTA AGTGGGTTTC CGACATTGCT ACATTCTTCT CAAAAGATTT CAGCACATTC AGGTTCATTA ACGATTACTG TGGGAAGAAT CCCGAGTGCG ACCCCGATTT GCTCGATGCA AAACTCACAG ATATCAGGGC TATTGCAACC AGGCAGCTTG GATGCATCGT TATTGATGCA GACTGCACCA TTGATGAAGT TACCGACATT TTCATTCGCA TCAACTCCAA GGGTGCCGTT TTGTCCCAAG CGGACTTTGC CATGTCTAAG ATTGCAGCTG ATGAGGCCCA TGGCGGATCG ATGCTCCGTA AGGCGATTGA CTACTACTGT CATCTTGCTG TGAAGCCAGA ATTCTGGTCG ATCGTCTCCG ATCGAGATCC TGAATACATG GCTAGCGAAT ACGCGCAGAA AGCCGAGTGG CTGAAGAGCG ATCACGACAA TATATACGAC CCTGACTATA ACGACGTTTT GCGTGTGGCA TTCATGCATG AGTTCGGGCG AGGAAAGTTG CCGGACTTGG TTGCTCTCCT TTCAGGACGT GACTTTGAAG CACGAGATTA TAAGGGAGAA ATAGCTGACG AGTCTTTTGA ACGCCTGAAA GCGGGCGTGC TCCGATTCAT GGATCGTAAT AATTTTCAGG ACTTCGTGCT TTCGCTCCGT TCTGCGGGCT TCATTTCGCC TCAAATAATC TATTCAAAGG GTGCGGTCAA TTTCGCCTAC AACCTCTATC TAACGTTGCG AAGGAATAAG GACATCCCGT CGACGGACGT AAAGCGTTGG GTGCAGCGCT GGTATGTCAT GTCGGTGCTT ACGGGCCGTT ATTCGGGGTC TTCGGAAACA GTGATGGATC GCGATATCCG CATGATTGCT GAACAGGGTT TCTTTACGGT ATACGAGAAC GTAGTCGCTG CAAGGCTATC TGATACGTTC TGGCAAGTAG AGCTTCCGCA GAAGCTTGAA ACAACGAGTA CTCGTACGGG TGCATGGCTT GTTTACGTGG CAAGTCAAGT AAAAGAAGCG GCGAACACAT TGTTCTCCGG TGGAGTCAAG GTTTCAGACG TGGTGGCTAC TATCGGCGAC ATCCATCATA TATTTCCGCG GAATTATCTC AAGAAAGAGA TCAATGCTCC GCAGAGCCTT TATAACCAGG TGGCGAATTA CGCTTACCTT GAGAAGCGCA TCAATATTAA GATTGCTGAC CGCAAGCCTG GCGAATACTT CACTGAGGCA AAAAACGCTT GCTTATCAGG GTCTGAATAC TTTGGGGACT TAACGGATAG CGACTCATTG ATGACGAACC TTACAGATAA CTGCATTCCG GAGGGAATCT TTGGCATGGG CGCAGAAGAT TACGAGGCAT TCCTTGCTGC GCGTAGGCGT CTGATGGCAA AGAAAATAGA AGCGTATTTC AAAGGACTGT AA
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Protein sequence | MKDRYSVTNY SVQSILGLIE SEDIAIPEIQ RPFVWSSTKV RDLVDSLYHG YPTGYLITWK NPDVKVKGGG TSEGKTVLID GQQRVTALMA ALAGLKVLND DYESKRIKIA FNPLYEGEDT PFAVLTPIIE KDSKWVSDIA TFFSKDFSTF RFINDYCGKN PECDPDLLDA KLTDIRAIAT RQLGCIVIDA DCTIDEVTDI FIRINSKGAV LSQADFAMSK IAADEAHGGS MLRKAIDYYC HLAVKPEFWS IVSDRDPEYM ASEYAQKAEW LKSDHDNIYD PDYNDVLRVA FMHEFGRGKL PDLVALLSGR DFEARDYKGE IADESFERLK AGVLRFMDRN NFQDFVLSLR SAGFISPQII YSKGAVNFAY NLYLTLRRNK DIPSTDVKRW VQRWYVMSVL TGRYSGSSET VMDRDIRMIA EQGFFTVYEN VVAARLSDTF WQVELPQKLE TTSTRTGAWL VYVASQVKEA ANTLFSGGVK VSDVVATIGD IHHIFPRNYL KKEINAPQSL YNQVANYAYL EKRINIKIAD RKPGEYFTEA KNACLSGSEY FGDLTDSDSL MTNLTDNCIP EGIFGMGAED YEAFLAARRR LMAKKIEAYF KGL
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