Gene Shel_02870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02870 
Symbol 
ID8394179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp345797 
End bp347608 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content49% 
IMG OID644985058 
Producthypothetical protein 
Protein accessionYP_003142704 
Protein GI257063032 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC GCTATTCAGT AACCAATTAC TCGGTTCAGA GCATCTTAGG GCTTATCGAG 
TCGGAGGATA TTGCTATTCC TGAAATTCAG AGGCCGTTTG TCTGGAGCAG CACAAAAGTT
CGCGATCTTG TGGATTCGCT TTATCATGGA TACCCAACCG GCTACCTCAT TACCTGGAAA
AACCCAGACG TAAAGGTCAA GGGTGGCGGG ACGTCTGAGG GAAAGACGGT TCTTATTGAC
GGCCAGCAGC GAGTTACTGC GTTGATGGCG GCGCTTGCGG GTCTAAAGGT TTTGAACGAC
GACTACGAAT CCAAGCGTAT AAAGATCGCG TTCAATCCTC TCTACGAAGG TGAGGACACG
CCGTTTGCGG TGCTGACGCC GATTATCGAA AAGGATAGTA AGTGGGTTTC CGACATTGCT
ACATTCTTCT CAAAAGATTT CAGCACATTC AGGTTCATTA ACGATTACTG TGGGAAGAAT
CCCGAGTGCG ACCCCGATTT GCTCGATGCA AAACTCACAG ATATCAGGGC TATTGCAACC
AGGCAGCTTG GATGCATCGT TATTGATGCA GACTGCACCA TTGATGAAGT TACCGACATT
TTCATTCGCA TCAACTCCAA GGGTGCCGTT TTGTCCCAAG CGGACTTTGC CATGTCTAAG
ATTGCAGCTG ATGAGGCCCA TGGCGGATCG ATGCTCCGTA AGGCGATTGA CTACTACTGT
CATCTTGCTG TGAAGCCAGA ATTCTGGTCG ATCGTCTCCG ATCGAGATCC TGAATACATG
GCTAGCGAAT ACGCGCAGAA AGCCGAGTGG CTGAAGAGCG ATCACGACAA TATATACGAC
CCTGACTATA ACGACGTTTT GCGTGTGGCA TTCATGCATG AGTTCGGGCG AGGAAAGTTG
CCGGACTTGG TTGCTCTCCT TTCAGGACGT GACTTTGAAG CACGAGATTA TAAGGGAGAA
ATAGCTGACG AGTCTTTTGA ACGCCTGAAA GCGGGCGTGC TCCGATTCAT GGATCGTAAT
AATTTTCAGG ACTTCGTGCT TTCGCTCCGT TCTGCGGGCT TCATTTCGCC TCAAATAATC
TATTCAAAGG GTGCGGTCAA TTTCGCCTAC AACCTCTATC TAACGTTGCG AAGGAATAAG
GACATCCCGT CGACGGACGT AAAGCGTTGG GTGCAGCGCT GGTATGTCAT GTCGGTGCTT
ACGGGCCGTT ATTCGGGGTC TTCGGAAACA GTGATGGATC GCGATATCCG CATGATTGCT
GAACAGGGTT TCTTTACGGT ATACGAGAAC GTAGTCGCTG CAAGGCTATC TGATACGTTC
TGGCAAGTAG AGCTTCCGCA GAAGCTTGAA ACAACGAGTA CTCGTACGGG TGCATGGCTT
GTTTACGTGG CAAGTCAAGT AAAAGAAGCG GCGAACACAT TGTTCTCCGG TGGAGTCAAG
GTTTCAGACG TGGTGGCTAC TATCGGCGAC ATCCATCATA TATTTCCGCG GAATTATCTC
AAGAAAGAGA TCAATGCTCC GCAGAGCCTT TATAACCAGG TGGCGAATTA CGCTTACCTT
GAGAAGCGCA TCAATATTAA GATTGCTGAC CGCAAGCCTG GCGAATACTT CACTGAGGCA
AAAAACGCTT GCTTATCAGG GTCTGAATAC TTTGGGGACT TAACGGATAG CGACTCATTG
ATGACGAACC TTACAGATAA CTGCATTCCG GAGGGAATCT TTGGCATGGG CGCAGAAGAT
TACGAGGCAT TCCTTGCTGC GCGTAGGCGT CTGATGGCAA AGAAAATAGA AGCGTATTTC
AAAGGACTGT AA
 
Protein sequence
MKDRYSVTNY SVQSILGLIE SEDIAIPEIQ RPFVWSSTKV RDLVDSLYHG YPTGYLITWK 
NPDVKVKGGG TSEGKTVLID GQQRVTALMA ALAGLKVLND DYESKRIKIA FNPLYEGEDT
PFAVLTPIIE KDSKWVSDIA TFFSKDFSTF RFINDYCGKN PECDPDLLDA KLTDIRAIAT
RQLGCIVIDA DCTIDEVTDI FIRINSKGAV LSQADFAMSK IAADEAHGGS MLRKAIDYYC
HLAVKPEFWS IVSDRDPEYM ASEYAQKAEW LKSDHDNIYD PDYNDVLRVA FMHEFGRGKL
PDLVALLSGR DFEARDYKGE IADESFERLK AGVLRFMDRN NFQDFVLSLR SAGFISPQII
YSKGAVNFAY NLYLTLRRNK DIPSTDVKRW VQRWYVMSVL TGRYSGSSET VMDRDIRMIA
EQGFFTVYEN VVAARLSDTF WQVELPQKLE TTSTRTGAWL VYVASQVKEA ANTLFSGGVK
VSDVVATIGD IHHIFPRNYL KKEINAPQSL YNQVANYAYL EKRINIKIAD RKPGEYFTEA
KNACLSGSEY FGDLTDSDSL MTNLTDNCIP EGIFGMGAED YEAFLAARRR LMAKKIEAYF
KGL