Gene Shel_02390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02390 
Symbol 
ID8394131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp290442 
End bp291098 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content62% 
IMG OID644985010 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003142656 
Protein GI257062984 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG ACGCATTCTT CATCGTCTCC AAACTTTTCT CCTACCCTGA CCAGGCGCTT 
GCACGCGAAC TTGTCGAAGG GAACGGCCTG AACGAGCTTG CCGAGGCTCT GCGCATCTGT
GCGACCGGCC CCGCCAATCT CGACGACGCC GATGGATTCG AAACCCGTAA CGGCTCGTTC
GAGGAGCTTG AGCAGGCGGT TCATGCCTTC CGTCAGCATT TCGGCCCGAT GTCAGTCGAC
GAGGCGCTCC ATGACATGCG CATCGAGCAC ACCAATGCGC TTGCCGGCAT GCCGAAGCCG
ATGGTGCAGC CGTACGAAAG CATCTTCCGA GGTGAAGCGG AAGGCCGGCG CGTGCTCATC
ATGGTTGACG ACATCGCCGC GCAGGTGCGC GCCGCATACA AATCCGCCGG CGTCGTACAG
GTCAACGGGA GCGAACCGGC CGACCATGTG TCGACCGAAC TCGAGTTCCT CGGTCTGCTC
GCCGATCGCG ACGACCCGAC ATTCCGCAGT TTCGCCGAGG ACCACGTCTT GTCGTGGATG
CCCGATTTCG CCCGCAATGT CTTGGCCTGT GCAAATGACG GCGGACTCAT GAGACTCGCC
GCCGCATCGT TGCTCCATCT CCTTGGCACG CTCGCCCACC CCGCCGATTG CCGATAA
 
Protein sequence
MSPDAFFIVS KLFSYPDQAL ARELVEGNGL NELAEALRIC ATGPANLDDA DGFETRNGSF 
EELEQAVHAF RQHFGPMSVD EALHDMRIEH TNALAGMPKP MVQPYESIFR GEAEGRRVLI
MVDDIAAQVR AAYKSAGVVQ VNGSEPADHV STELEFLGLL ADRDDPTFRS FAEDHVLSWM
PDFARNVLAC ANDGGLMRLA AASLLHLLGT LAHPADCR