Gene Shel_01800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01800 
Symbol 
ID8394072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp221552 
End bp221890 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content58% 
IMG OID644984953 
ProductHIRAN domain-containing protein 
Protein accessionYP_003142600 
Protein GI257062928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC CGTCGCGCCA TATAAATTCG TTCTACGTCG CCGGTTTCCA GTATTGGGAC 
GGCGCCTTGG TCCTGGACAA ACTCAAGCCG GGCAAGAAGC TCAAGCTTGT GGCCGAGTTC
GACAACCCCT ACGACAGCAA CGCCGTGGCC TTGTACTACA AGAAGACCAA GGTTGGCTTC
GTGCCCAGGG ATATGAACTG GGAAGTCGCC TCCATGCTGC GTTTCGGGCA CAACGACGTG
TTCGAGGCCC GCATCCAGCA GGTCGATCCG CAGGCCGAGC CCAAACGCCA GGTCCGCGTT
GCCATCCTCG TGACCGACGC GACCAAATCC AAGAAATAG
 
Protein sequence
MYKPSRHINS FYVAGFQYWD GALVLDKLKP GKKLKLVAEF DNPYDSNAVA LYYKKTKVGF 
VPRDMNWEVA SMLRFGHNDV FEARIQQVDP QAEPKRQVRV AILVTDATKS KK