Gene Shel_01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01780 
Symbol 
ID8394070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp219623 
End bp220606 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content63% 
IMG OID644984951 
Producthypothetical protein 
Protein accessionYP_003142598 
Protein GI257062926 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTG CAACGCTGCT GGAAATCATC GACGATTTGG GACATGGCGT CACACCCGAC 
CTGACGGTGG AGGATTTCCC GTGCTTCGCG GAGGATGCGG CGGGGGACAA CCCGCACCTG
TCTCCTGCGG TGCTCGACCG CATCGCCGCA GGTCTGGGTC GCGCCGACAT CCCCACCTTC
GAACGCGCGT TGCGCGCCAT GGATGAGGGC GACCTGGCGT GGATCGGGTT CAAGGTGGTC
ATCGATGGCG ACGCCGCCGT AGGCAACGTG GACAACGAGG TTACCAAGAA GTACGGCGAC
GTGGGCTCGG CTGACGGCCA GGACCTGGTG TTTTTCTGCA ATGACGCCAA GGAGATCGTG
GCCTCGCGTC CGTATTCGCC CCGCGACACC TTCCAAATGA AGGACGTCAC CCGCGGACCC
TCGATGCATA ACGACCAATT CGCGGGTCTG ACCTGGGCAT CCGTGGCTCT GTTCGATCGG
GTGGAAGTGT GGATCGTGGG AGCCTCCGAC GCTGCCGTCG AGACGGCAGC GCTGGCGAAG
CACGTGGGCT TCAGGGTGCA CGTGATCGAC GACAACGAGG CGTTTATTTC CGAAGACCGC
TTCCCCGAGG TGGACCGCAT CCTGCTGGAT GATTTCCGCG AGCTGTTCGA CATCAAACCT
GCCGCAAACG CCTACGTGTG CGTGCTGACC CGCGGCCACA TGCATGACCC GGAAGGCTGC
CTGTGGGGCA ACGCCAACAA AGCCCACTAC ATAGGCATGA TGGGCTGCAA GGGCAAGAAC
AACCGCGTGC ACGACCTGTG CATCGAAGGC GGCATGACCG AGGAGCAGTG GGAGGCCGTC
AAGCGTCCCA TCGGCCTGAA GTTCGGCGCG AAAACCCCTG CTGAGCTGGC CATCGCCATT
GTGGCTGAGC TGATCGACGT GCGCTACAAG CAGAACTACA GCCAAGAGGC CCGCGACCGC
CACGAGCAGA GCCTGGGTCG CTAG
 
Protein sequence
MERATLLEII DDLGHGVTPD LTVEDFPCFA EDAAGDNPHL SPAVLDRIAA GLGRADIPTF 
ERALRAMDEG DLAWIGFKVV IDGDAAVGNV DNEVTKKYGD VGSADGQDLV FFCNDAKEIV
ASRPYSPRDT FQMKDVTRGP SMHNDQFAGL TWASVALFDR VEVWIVGASD AAVETAALAK
HVGFRVHVID DNEAFISEDR FPEVDRILLD DFRELFDIKP AANAYVCVLT RGHMHDPEGC
LWGNANKAHY IGMMGCKGKN NRVHDLCIEG GMTEEQWEAV KRPIGLKFGA KTPAELAIAI
VAELIDVRYK QNYSQEARDR HEQSLGR