Gene Shel_01370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01370 
Symbol 
ID8394029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp170492 
End bp171325 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content58% 
IMG OID644984910 
Producthypothetical protein 
Protein accessionYP_003142560 
Protein GI257062888 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.867089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG AGTCAGAGCA CAACGCGGCG CACCGCATCC GCGAAACCAT TCAGGCAAAA 
TCGGCGGAAA TCAAAGGGCG CGAGGCCGAA GTCGAGGAGA AACTCGACGT TCGCGTGGTC
CATCAGCCCA AAAGCACGCG GCTGACCCAG GCTGACCTGG CAAAACTCGG TCTTATGGCC
GTATTCTTCC TGCTTGTGCT GGTTCTGTTC GTGCTCATGT TGCCCTGGAT CAAAGAGCTT
ACCGAAGTGA GCGGGCGCGA AGAGCTGGTT TCTCAGGTTC GCAGCGCCGG GCCTGTGGGC
GTGCTCATGC TATTGGGTTT GCAATTGCTC CAGATTATCG TGGCGTTCAT CCCCGGCGAG
GCCGTGCAGA TGGTGGCCGG CATGATGTAC GGTCCTTTGG GCGGCACGCT CATCATCCTT
ACGGGCTGCC TGTTTTCCAG CGCGCTGTTG TTCGCCGTGG TGCATAAGCT GGGCGCACCC
TTTGTGCGTG CCATGATTCC CGAAAAATGG ATGGGCAAGC TGGAAGACTT CGAGAACTCC
GGCAACAAGC TCGACATCAT GGTGTTCGTG CTGTTCCTCA TCCCCGGCAT GCCCAAGGAC
GTGCTTACCT ACCTGGTGCC GCTGACCAAT ATGAAGATGA GCCGGTTCGT GGGGCTGACC
ACCATCGCCC GCATCCCCGG CGTGGTCATG TCGACTTCGG CCGCCAACGG GCTGCTGGAG
GGAAACTACA TGCTTGTTGC CGCAATCTGC GGCGTCATTG CGGTCGTGGC TGTGATCGGC
TTCTTCAACC GCGATAGGAT CATGGCCGCA TTCCAAAAGA AGCAGAAAAA GTAA
 
Protein sequence
MNKESEHNAA HRIRETIQAK SAEIKGREAE VEEKLDVRVV HQPKSTRLTQ ADLAKLGLMA 
VFFLLVLVLF VLMLPWIKEL TEVSGREELV SQVRSAGPVG VLMLLGLQLL QIIVAFIPGE
AVQMVAGMMY GPLGGTLIIL TGCLFSSALL FAVVHKLGAP FVRAMIPEKW MGKLEDFENS
GNKLDIMVFV LFLIPGMPKD VLTYLVPLTN MKMSRFVGLT TIARIPGVVM STSAANGLLE
GNYMLVAAIC GVIAVVAVIG FFNRDRIMAA FQKKQKK