Gene Shel_01310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01310 
Symbol 
ID8394023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp165075 
End bp165830 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID644984904 
Productpredicted metal-dependent hydrolase 
Protein accessionYP_003142554 
Protein GI257062882 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAG GACTTTGGGA TGACCTGGCA CGTTTGAAGA AATGCACGTG GGTGGAGCTT 
TCGCATCCGC TCAACGAGAG CAGCCCGTAC TGGGGCGGCA TGCCCGACGG GGTGGTGGAG
CTGAACAAAG TGGTGTTCGA CTACGACGAG GAAATCCTGA GCTGCCGTAT CCATGTGCAG
AAATTCCCCG GCCAGTTCGG CACGCACATT GACTTCCCGT TGCACTTCGA GGAGGGCCTG
GCGGCCTCCG AAGAATACGG GCTGGAGCAC ATGGCCTATC CGCTGGTGGT TCTGGACATC
ACGCCGCAGG TGGAGCGGAA CTGCGAATAC GCCGTAACCG TCGATGACAT CAAGGCGTAC
GAGAAGGAAT TCGGCAAGAT TCCCGAAGGC GCGTTCGTGG CCCTGCGCAC CGATTGGTCG
AAGCGCTGGC CGGACAACAA CGCCCTCAAC AACTTCGATG CCGAAGGCGG CGAGCATTGC
CCCGGTTGGT CGATGGAGGC CCTGAAGTTC CTGTACGAGG AGCGTCGCAT CGCAGCCAAC
GGGCACGAGA CCTTCGACAC CGATGCCAGC CCGCTGGCCG TCGCCGCAGA CGACCTGGCC
TGCGAACGGT ACGTGCTGGC CAACGGCCAT GTGCAGGTGG AGGTCATGGC CAATCTTGAT
CTGGTGCCGC AGTGGGGCGC CATCATCTTC GTGGCCTGGC CGCGTATCGA GGGTGCATCC
GGCATGCCCG TCCGCGCCTG GGCCGTGTTC GAATAA
 
Protein sequence
MAAGLWDDLA RLKKCTWVEL SHPLNESSPY WGGMPDGVVE LNKVVFDYDE EILSCRIHVQ 
KFPGQFGTHI DFPLHFEEGL AASEEYGLEH MAYPLVVLDI TPQVERNCEY AVTVDDIKAY
EKEFGKIPEG AFVALRTDWS KRWPDNNALN NFDAEGGEHC PGWSMEALKF LYEERRIAAN
GHETFDTDAS PLAVAADDLA CERYVLANGH VQVEVMANLD LVPQWGAIIF VAWPRIEGAS
GMPVRAWAVF E