Gene Shel_00920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00920 
Symbol 
ID8393984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp121152 
End bp122153 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID644984865 
Productalpha/beta superfamily hydrolase 
Protein accessionYP_003142515 
Protein GI257062843 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.650913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.340226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA CCGAAGAACT CGAGCTCACT CAGGAGTGGG ACAAGACGTT CCCGAAAAGC 
GACAAGGTCG ACCACAGCAA GGCGACCTTC GTCAACCGCT ACGGCATCAC GCTGGCGGCG
GACCTGTACG TACCCCAGGG CGCGCAGGGC CAGCTGCCCG CCATCGCCGT ATGCGGACCC
TTCGGCGCCG TAAAGGAGCA GTGCTCCGGT TTGCACGCCC AGGAGCTGGC CGAACGTGGC
TTCGTGACCA TGGCCTTCGA CCCGTCTTTC ACCGGTGAAA GCGGCGGCGC GCACCGCTAC
ATGGCCTCGC CCGACATCAA CACCGAGGAC TTCATGGCTG CCGTGGACTT CCTGTCGCTG
CATGAGCTGG TGGACGCGGA CCGCATCGGC ATCTTGGGCA TCTGCGGCTG GGGCGGCATG
GCCCTGAACG CAGCGGCGCT GGACACCCGC GTGAAGGCGA CCGTGGCTTC CACCATGTAC
GACATGACCC GCGTCAACGC CAACGGATAC TTCGATTCCG AAAACACCGA AGAGGCACGC
TACGCCAAGC GTGCCGCCAT GTGCGCCCAG CGCCTGGTGG ATTACAAAGC CGGCGAATAC
GCCCTGGGCG GCGGCGTGGT GGACCCGCTT CCCGAGGATG CGCCCAAGTT CGTTGCCGAC
TACTACGACT ACTACAAGAC GCCCCGCGGC TATCATCCGC GCTCGCTGAA TTCCAACGGC
GGATGGAATG TAATCGGTTG CGAATCCTTC ATGAACCAGC CCATCCTGCA TTACAGCAAC
GAGATCCGCT CCGCTGTGCT CGTGATGCAT GGCGACGCGG CCCATTCCTT CTATTTCGGC
AAGGACGCTT TCGCGAACAT GGTGGAGGGC AACGCCTACG CCGACAACAA GGAGCTGCTG
GTCATTCCTG GCGCATCCCA CACCGATCTG TATGACGGCG GCAAGAACCA GGCGATTCCC
TTCGACAAAC TGGAGGCGTT CTATCGCGAA TACCTGCGAT AA
 
Protein sequence
MMKTEELELT QEWDKTFPKS DKVDHSKATF VNRYGITLAA DLYVPQGAQG QLPAIAVCGP 
FGAVKEQCSG LHAQELAERG FVTMAFDPSF TGESGGAHRY MASPDINTED FMAAVDFLSL
HELVDADRIG ILGICGWGGM ALNAAALDTR VKATVASTMY DMTRVNANGY FDSENTEEAR
YAKRAAMCAQ RLVDYKAGEY ALGGGVVDPL PEDAPKFVAD YYDYYKTPRG YHPRSLNSNG
GWNVIGCESF MNQPILHYSN EIRSAVLVMH GDAAHSFYFG KDAFANMVEG NAYADNKELL
VIPGASHTDL YDGGKNQAIP FDKLEAFYRE YLR