| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00880 |
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| Symbol | |
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| ID | 8393980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 116660 |
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| End bp | 118096 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644984861 |
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| Product | putative cell wall binding protein |
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| Protein accession | YP_003142511 |
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| Protein GI | 257062839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.938683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.955176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTG CAGCAAAGCG GTTCGCGTAT GTGGTTGGGG CATGTCTTGC GTGTCTGGTT
GCGATTGCCG CAGCGCCGGC GCAGGCGCAC GCGGTCGTTC ACCCCTCGGC CGACGACATC
GTCCTCGGCG GGGTCGTGTA TTCCGCATCG CATCCGGAAA CGGTGTCGTA TGACGAAAGC
TCCGGCGTGC TGACGCTGGA ATACTACGAC GGCGGAGGCA TCCAGGTATT CGGGCAATCC
GATGTTGAAA GCCAGCTGAC GATCGATCTG GTCGGGTACA ACCAGATTTC GTGCACGGGC
GAGCCCGACA TCGACCCGGG CATCCGTATG ACGGGCGGCA AAGGGAGCAT CGAGATCACG
AGCAGCGACC GGGCATACCT CGAGCTCGTC GCGAATTACA CCTATTCCGG AATCTACCCC
AACCTCTGCG GCGTGATGGT GGATGAGAAC CTCACCGTAT CGGGAAACGC CGACGTATGG
GTGTGGACTG CCAGTTCGTC GAGCGACCAC GTCCGCGGGT CGGGCATCTG TTGCCAGGAT
GGCGGCGTAA TCGTGAAAGA CCACGCCAGG CTGAAGGTGT GGGTCACGTT GGATTGGTCG
AACGGCTGCT ACGGAATCGA GAGCCATTCA ATAAGCACGC CCGCCCTTGT CGCGACAACG
GACGACGAGG TGTCTTTCGA GTGCACGACC GGACACGGCG CCAACACGTT CGCTGTGTAC
CAGCCGGGCG CGTCCGTCCC GTTGGGGCTT TACGGCGTGC CGTACGTCGA GGTGGCTGCG
GTGTATGTGG CAACCAATAA CGGCATGGAC GGTTTCAACT TCGGCCTGCC GAGCTATTCG
TTTTCAGCCA CCGGGCCGAA CGCGTATGTC TACAAGCTGG AGACCGGGTG GCTGAAAGTG
GGTTCGAAAT GGCGCTACTA CCTGGGTGAT GGCGAATTCG TGACAAACGA CTTCCGCAGC
GACAAGAACA AGACCTACTA CTTCGACGCC GACGGATTCA TGGTCACGGG GTGGAAGAAG
GTTGCCGGTG CGTGGTATTT CTTCAGCAGG AACGGCGGCG CCATGCAGTT CGGTTGGGTG
AAAGACGGCG GCAAGTGGTA CTACCTCAGT TCCGGCGGCA CCATGGCCAC GGGTTGGCAG
AAACTTGGAT CCACGTGGTA CTACTTTGAC GTGAACAGCG GCGCCATGAA GACCGGTTGG
CAGAAGATCA GCGGGAAATG GTACTGGTTT GAAAGCTCCG GCGCCATGAA AACCGGCTGG
TTGCGAAGCG GCGGCAAGTG GTACTACCTG CAGAGTTCCG GCGCTATGGC CACAGGCTGG
CTGAAGGTGG GCTCTACCTG GTACTACTTC GACAGCTCGG GGGCCATGGC CACGGGCACC
AGGACCATCA ACGGCAAGAC CTATCGGTTC AGCTCGAGCG GCGCGTGGAT TGCCTAA
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| Protein sequence | MTVAAKRFAY VVGACLACLV AIAAAPAQAH AVVHPSADDI VLGGVVYSAS HPETVSYDES
SGVLTLEYYD GGGIQVFGQS DVESQLTIDL VGYNQISCTG EPDIDPGIRM TGGKGSIEIT
SSDRAYLELV ANYTYSGIYP NLCGVMVDEN LTVSGNADVW VWTASSSSDH VRGSGICCQD
GGVIVKDHAR LKVWVTLDWS NGCYGIESHS ISTPALVATT DDEVSFECTT GHGANTFAVY
QPGASVPLGL YGVPYVEVAA VYVATNNGMD GFNFGLPSYS FSATGPNAYV YKLETGWLKV
GSKWRYYLGD GEFVTNDFRS DKNKTYYFDA DGFMVTGWKK VAGAWYFFSR NGGAMQFGWV
KDGGKWYYLS SGGTMATGWQ KLGSTWYYFD VNSGAMKTGW QKISGKWYWF ESSGAMKTGW
LRSGGKWYYL QSSGAMATGW LKVGSTWYYF DSSGAMATGT RTINGKTYRF SSSGAWIA
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